CI01000222_00200608_00202045


Basic Information

Item Value
gene id CI01000222_00200608_00202045
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 200608 ~ 202137 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000222_00200608_00202045.mRNA
GGTCTCACTCTTTGAAGGCATTTGTAACATATATAGTTGGACAGACACCATTTCCTGAGTTCAGTGCTGTGCTGATGTTGGATGATCTGCAAATAGGATATTATGACTCTGTCACATGGAAACCTGTCTATCGCACTAACAGTACTGATTCACAGTTCTATGATGAAGAGCAAAAGGATGCTGATACTGTATTTCGCGTTATGTATGACATCTTTAAAGAAAGAGAACTTTATCTTAAGGAGAACCAAAATTGCACATATCGTGTACATGTTCTTCAGAGAATTGCTGGATGTGAATTGTTGAACAATGATAAACCAGGTCCACTTCAGAGATGGGATGCTTTAGATGGACAAACTATAGAGGAGCTCACCTTTGACATGGAAAAAAATAATATAGAGACACAAATGACATGGAGGCCATGGGACGAACAAAGATGTACTCTTGCAAAGTATATGTATAAAAATGTTTATCATCCTATTTGCTTTAAAGTTTTGCTGAGGTACCTGTATATGGAAAAGAACAATGTACTGAGAAAAGAGAAACCCAGAGTCAGACTCATGAGGAAGACACTCACAGACTCTCAAAGGCTTCAGATCAGTTGTCTGGCCACTGTTTTTTACCAACGTCACATTAACCTGACTCTGTTCAGAGATGATCAGCCTGTGGATGATGATCAGATCACAGGAGGAGAGATTCTGCCCAACGGAGACAGAACTTGGCAGATGAGGAAGAGTTTGGTGATCAGCGCAGAAGAACCATGTGAGGAACATACATACAGCTGCACAATGAAGCACCACAATCTGGACAACAAACTGGACATTACGTTTGATGTGGCTGAATGTGACGCAGGACCTTTCGGTCGGTCTGTAATTATCAGTGTGCTGGTATCAACAATGTGTGTGGCTGTTCTCCTCATAACTGCACTCATTATATGGAGGAAGAAGAGACGTGCTGCTGGAAAATGTTCTACAGTCCACTTCATTACACCTGATGCTAAATTAGAAAAAGAAACCTAACATAACTTCCTTTAGAGTGTTTCTCAAACTTTGGAGGTAGTAGGGAAGGGTTCCGAGCCTCACCAGTCCTCAATTGCCCCAACAAAATGTTA
>TU451738
CCCAACGGAGACAGAACTTGGCAGATGAGGAAGAGTTTGGTGATCAGCGCAGAAGAACCATGTGAGGAACATACATACAGCTGCACAATGAAGCACCACAATCTGGACAACAAACTGGACATTACGTTTGATGTGGCTGAATGTGACGCAGGACCTTTCGGTCGGTCTGTAATTATCAGTGTGCTGGTATCAACAATGTGTGTGGCTGTTCTCCTCATAACTGCACTCATTATATGGAGGAAGAAGAGACGTGCTGCTGGAAAATGTT

Function

NR:

description
nonclassical MHC class I antigen

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000222_00200608_00202045.mRNA False 1108 mRNA 0.41 4 200608 202137
TU451738 True 268 lncRNA 0.46 2 201595 201995

Neighbor

gene id symbol gene type direction distance location
CI01000222_00167369_00168395 NA coding upstream 31856 166197 ~ 168752 (+)
CI01000222_00214433_00217905 NA coding downstream 12296 214433 ~ 217919 (+)
CI01000222_00232414_00239331 NA coding downstream 30061 232198 ~ 239410 (+)
CI01000222_00255680_00256841 NA coding downstream 53475 255612 ~ 256846 (+)
CI01000222_00315211_00317790 NA coding downstream 113074 315211 ~ 318086 (+)
CI01000222_00328639_00330158 NA coding downstream 126502 328639 ~ 330374 (+)
G394348 NA non-coding upstream 6934 193458 ~ 193674 (+)
G394297 NA non-coding upstream 42429 134534 ~ 158179 (+)
G394293 NA non-coding upstream 88485 109188 ~ 112123 (+)
G394292 NA non-coding upstream 97752 54851 ~ 102856 (+)
G394299 NA non-coding upstream 107397 59611 ~ 93211 (+)
G394362 NA non-coding downstream 440 202577 ~ 202889 (+)
G394376 NA non-coding downstream 30726 232863 ~ 242720 (+)
G394366 NA non-coding downstream 39472 241609 ~ 251264 (+)
G394394 NA non-coding downstream 66807 268944 ~ 269180 (+)
G394395 NA non-coding downstream 68033 270170 ~ 270521 (+)
G394294 NA other upstream 51698 132044 ~ 148910 (+)
G394303 NA other upstream 157761 31433 ~ 42847 (+)
G394482 NA other downstream 259852 461989 ~ 462466 (+)
G394559 NA other downstream 548210 750347 ~ 752670 (+)

Expression


Co-expression Network