CI01000222_00531504_00560379


Basic Information

Item Value
gene id CI01000222_00531504_00560379
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 531155 ~ 560714 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000222_00531504_00560379.mRNA
CTATATATAGGCAGGTCAGTTAACAGCCCACTGGTTTAAAATTTGCCATTAAAACATGGTGGAAAACGTGTTTATCTTTCATTTCCAATGTGTATATCATATAATCAGAGCATCAGAAGTTTCTGTTTATCTGACACCAAACCTGTTGATGTGAGTAAATCCTTCTGTTTCTGTTGAACCAGTTATATCTTGAATTAAGGAGAATTTTGACAATGTTTTTTTTCCCAGAAGTACAGACATTATTTAGCCAAGAAGAAGAGAAGATCCTTGGATGAAGACCTTGAAGAAGTAATAATACGAGATTGCTTCATTTATTTACTTTGTTTCTAAGTTGCTCTGTTGGATCAAGATGAATTTTATCCATGAACAAGAAAAATCTCAACCTTGTGACTGTACTCTTTATAAAAAGGGCACAAAACCACTGTCTGTCACTTTAGATGAAGTAGCTAAGAATGTGTTAATGTACATTGGAGGGTCTCCTCACTTAAACAAAACTGAAAAACAGATTGAAACCAAATATAGCTTTAAAAAGGAGTGTGATGGTTGCTGGTCAGAGGATAATATCAAACGAGCTTGGGGAAAAACACAAAGAATGAATGACACGTCATTAAAAAGAAAACGCTGGACTCTTGCAATACTGTTACAGGTGATAAAAAGAAGTTCAGGTTTTAATGAGTTTAAAGACAATACATCTGATCAACTTCAAGCTGAAAAAGACATTGTAAGATCCAAAGGGTCAGCATCAAAAAGTCAACTTCCAAGTTCCAATGAAAAAGAACAGAATAGAGGAGGCTCAAACAAACCTAATTCTCAAAACTTCTACATACGTATCCCACTCTCAGTAATGTTTAGAAATGAATCAACCTACTATAGGGGTGGGGGAAAAAAAAACATCTTATGTTATGTTATGTTATATAACAATCAAACCAGGAATGCTGCATGGGTGTATGAGATATTGAACAAGAGTACTTTAGCTACTGCTTCAGTTAAAGATAAAGATTGTAAATATGTAGATGACATTAAAAATCCACTCTACCAAGCAGCTAAGAGCACGGAAGGATGTGATGAAAGTGACTATGAACAAGGTCATCTTGCGGCCGCTGCCAATCACAGGTGGTGTAAGGAAGCCTACAAGGACACTTTTTTCCTCAGCAACATTGTACCACAGGATCCTCATTTGAACCAAGGCATGTGGAAACAATTGGAGGATTATTGTCAAGGCAAAAGTAAAGAAAATGGAGTTCGCAATGTCCATGTGTATTCTGGACCACTTTACCTACGAAGTGATGAAAAAAAAAAGCATGAGATATTGAAGATTTGGAGAACAAAAGTAGTGCCAACTCACTTTTTTAAGAATGATCATTGTCCAGGGAAGTGGAAGACGACGAAGATGACCGAATGCTTGGTGGTGCTACATCTCCAGAAGGAGCTCAATACAGCATTGAAATTATTTCAGGAGACACTTAAACAGAGAGAAAAGATTAAAAGAGAGTTCGAGAAAAATGTTCAACACATCAAGAACATACAACTGATACCAACTATCCTCAGAGATGTTCCAGGTGTCCAGTGTTATCTTGATGATATAATTGCGTTTGGAGATTCTGTTGCTACTCATGATGCCCATCTCAGGACAGTGCTGCACAAACTGCAATGCTTAATGGAGAGAAATGGGGAGATCAAAACAGCACTAAAGTCCTTACAAGAGAAATTTCAACACAATGAAAAAATGAAAGGAGAGTTTGAGAAAACAGTTCAACACATCAAGGGCTCGACATTAAAGCTTGACTGGGATAAATAGCCTGATCATCAGTAAGCTGCGAATGAGTGATTATTTGTGGCCTGTACTGGCAAAATGAGTCGCAATGAATAATTTTCAACCTTCAAAATTATGTATGATTTGTTGGAATCTGACAAAAATGACTTGAGCTACACCTGTTTGAAGTCGATAGAGTCAGCAAAGTCAATTTTGAAAAAAATCGAGTTAAAGTTTTCTGAAGGTTCCAAAGCAAAATTACCTAGCAACATTGCATCTTTTCCTCCCATTCTTTTCTTAATAACAATTGGTATATTAATAATCACAATACAACTCTTTTTGTTTTACCTTTGTTATTAAAAATAAGAACAAAGATGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000222_00531504_00560379.mRNA True 2133 mRNA 0.36 7 531155 560714

Neighbor

gene id symbol gene type direction distance location
CI01000222_00328639_00330158 NA coding upstream 200781 328639 ~ 330374 (+)
CI01000222_00315211_00317790 NA coding upstream 213069 315211 ~ 318086 (+)
CI01000222_00255680_00256841 NA coding upstream 274309 255612 ~ 256846 (+)
CI01000222_00232414_00239331 NA coding upstream 291745 232198 ~ 239410 (+)
CI01000222_00214433_00217905 NA coding upstream 313236 214433 ~ 217919 (+)
CI01000222_00584243_00585193 NA coding downstream 23287 584001 ~ 585218 (+)
CI01000222_00631228_00636853 NA coding downstream 70514 631228 ~ 636853 (+)
CI01000222_00695056_00696916 NA coding downstream 134342 695056 ~ 697046 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 211148 771862 ~ 787590 (+)
G394492 NA non-coding upstream 44936 478461 ~ 486219 (+)
G394478 NA non-coding upstream 71679 458218 ~ 459476 (+)
G394477 NA non-coding upstream 73108 457834 ~ 458047 (+)
G394459 NA non-coding upstream 79358 415838 ~ 451797 (+)
G394460 NA non-coding upstream 103947 426430 ~ 427208 (+)
G394486 NA non-coding downstream 12760 573474 ~ 583971 (+)
G394485 NA non-coding downstream 30556 591270 ~ 591853 (+)
G394519 NA non-coding downstream 43526 604240 ~ 706056 (+)
G394521 NA non-coding downstream 139070 699784 ~ 707290 (+)
G394544 NA non-coding downstream 154822 715536 ~ 715762 (+)
G394482 NA other upstream 68689 461989 ~ 462466 (+)
G394294 NA other upstream 382245 132044 ~ 148910 (+)
G394293 NA other upstream 419032 109188 ~ 112123 (+)
G394303 NA other upstream 488308 31433 ~ 42847 (+)
G394559 NA other downstream 189633 750347 ~ 752670 (+)

Expression


Co-expression Network