CI01000222_00695056_00696916


Basic Information

Item Value
gene id CI01000222_00695056_00696916
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 695056 ~ 697046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU451880
GTTGAGTTTGAACCAATACATCTTGATCCCTTTCTTTGAAATGTCTGGTAAAATATCAGCCTCTAAAGAAGCTGATCCAAATTCAATTGTCAGGTCACCCAATAAATTAGTCAACGGATGTCCTTCAGATTCTGACTTAAGGATAAGAAAATCTTATGTCATGTCATACAACAATGAAACCAAGAACGCTGAATGGGTGTATGAGATACTGAACAAAGACACTCTGAAGGTCAATTGTAAGGCGCACGGGAGCTTTGGAAGGAATGAATTTGTGGACAAAGACTATGAACAAGGTCATCTTGCTGCGGCTGCCAATCACAGGTGGTGTCAGGAAGCCTATCATGACACTTTTTTGATCAGCAACATGGCACCACAGAATAAAGGCTTAAACAAAGGTAATTGGAAAACTATTGAGAGTTACTGTCGATACAGAGCTATGAATGATGAAGTCTGTAATGTCCATGTGTACTCTGGACCACTTTACCTAAAAGAAAAAAAAAATAAAGAGGGTACTGAGGTGGAGGATTTCTATGATCGTGCTGACCCCAGTACACTGGAGCGGAAGGGAGGGAAAGTAGCACCAACTCACTTGTTTAAGGTGATAATTGTGGAGAATGAGGATGGGACAGTAGAAGAGCCGGAATGCTATGTGATGCTCAAAGTGAATAAA
>TU451881
GTTGAGTTTGAACCAATACATCTTGATCCCTTTCTTTGAAATGTCTGGTAAAATATCAGCCTCTAAAGAAGCTGATCCAAATTCAATTGTCAGGTCACCCAATAAATTAGTCAACGGATGTCCTTCAGATTCTGACTTAAGGATAAGAAAATCTTATGTCATGTCATACAACAATGAAACCAAGAACGCTGAATGGGTGTATGAGATACTGAACAAAGACACTCTGAAGGTCAATTGTAAGGCGCACGGGAGCTTTGGAAGGAATGAATTTGTGGACAAAGACTATGAACAAGGTCATCTTGCTGCGGCTGCCAATCACAGGTGGTGTCAGGAAGCCTATCATGACACTTTTTTGATCAGCAACATGGCACCACAGAATAAAGGCTTAAACAAAGGTAATTGGAAAACTATTGAGAGTTACTGTCGATACAGAGCTATGAATGATGAAGTCTGTAATGTCCATGTGTACTCTGGACCACTTTACCTAAAAGAAAAAAAAAATAAAGAGGGTACTGAGGTGGAGGAATTTTATGATCGTGCTGACCTCAGTACACTGGAGCGGAAGGGAGGGAAAGTAGTGCCAACTCACTTGTTTAAGGTGATAATTGTGGAGAATGAGGATGGGACAGTAGAAGAGCCGGAATGCTATGTGATGCTCAAAGTGAATAAA
>CI01000222_00695056_00696916.mRNA
AACATAATGGAGGTAAAATCAGAGCAACAGAAGTTACTGTCTATCTGACAGATCCCAACAAACCCATTAATGATAAAGGCTTAAACAAAGGCGTTTGGAAAACTATTGAGAATTACTGTCGAGACAAAGCTATGAATGATGAAGTTTGTAATGTCCATGTGTACTCTGGACCACTTTACCTAAAAGAAAAAAAGAATAAAGAGGGTACTGAGGTGGAGGAATTTTATGATCGTGCTGACCTCAGTACACTGGAGCGGAAGGGAGGGAAAGTAGTGCCAACTCACTTGTTTAAGGTGATAATTGTGGAGAATGAGGATGGGACAGTAGAAGAGCCGGAATGCTATGTGATGCTCAAAGTGAATAAAGATGATATAGATGTTGAAGAATCTGACAACAAAAAAGCTGTAAAAAATCAAGCATGATGAGCATATTATGATAATTGAGAAACTCTCTGGGCTGAAATTCATAGAAAGCCATCCCAATGTGGTAACGAAGGACTATATAAAGATGATTACAGGAAAAGGTGAAAAAGGAGAGTCATGTAGTGCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU451880 True 72 TUCP 0.41 1 696788 696859
TU451881 True 153 TUCP 0.40 1 696707 696859
CI01000222_00695056_00696916.mRNA False 552 mRNA 0.38 2 695056 697046

Neighbor

gene id symbol gene type direction distance location
CI01000222_00631228_00636853 NA coding upstream 58203 631228 ~ 636853 (+)
CI01000222_00584243_00585193 NA coding upstream 109838 584001 ~ 585218 (+)
CI01000222_00531504_00560379 NA coding upstream 134342 531155 ~ 560714 (+)
CI01000222_00328639_00330158 NA coding upstream 364682 328639 ~ 330374 (+)
CI01000222_00315211_00317790 NA coding upstream 376970 315211 ~ 318086 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 74816 771862 ~ 787590 (+)
G394493 NA non-coding upstream 50061 480250 ~ 644995 (+)
G394485 NA non-coding upstream 103203 591270 ~ 591853 (+)
G394486 NA non-coding upstream 111085 573474 ~ 583971 (+)
G394492 NA non-coding upstream 208837 478461 ~ 486219 (+)
G394478 NA non-coding upstream 235580 458218 ~ 459476 (+)
G394521 NA non-coding downstream 2738 699784 ~ 707290 (+)
G394544 NA non-coding downstream 18490 715536 ~ 715762 (+)
G394561 NA non-coding downstream 60959 758005 ~ 760127 (+)
G394482 NA other upstream 232590 461989 ~ 462466 (+)
G394294 NA other upstream 546146 132044 ~ 148910 (+)
G394293 NA other upstream 582933 109188 ~ 112123 (+)
G394303 NA other upstream 652209 31433 ~ 42847 (+)
G394559 NA other downstream 53301 750347 ~ 752670 (+)

Expression


Co-expression Network