G394394



Basic Information


Item Value
gene id G394394
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 268944 ~ 269180 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU451772
CAGGATCAACAAAATATGTTGATCCAGGAACATGTCTTACTTGGCAAAATCACGGTGACCATAGTATAATACTGTTTCGCATTTGAGGTGTTTACGTGATGACTACCCATACGGAAGGACTTCAGACACTTTCTTTCCCGGTAATGACCTTCAAAAGTCTGAATGTCTTTCTTTCTGTCTCTCTGTGTTTGTATTTTTGCTCAGTCTTTCCCTCCGGTTCTTATACGCTCAACCTCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU451772 True 237 lncRNA 0.41 1 268944 269180

Neighbor


gene id symbol gene type direction distance location
CI01000222_00255680_00256841 NA coding upstream 12098 255612 ~ 256846 (+)
CI01000222_00232414_00239331 NA coding upstream 29534 232198 ~ 239410 (+)
CI01000222_00214433_00217905 NA coding upstream 51025 214433 ~ 217919 (+)
CI01000222_00200608_00202045 NA coding upstream 66807 200608 ~ 202137 (+)
CI01000222_00167369_00168395 NA coding upstream 100192 166197 ~ 168752 (+)
CI01000222_00315211_00317790 NA coding downstream 46031 315211 ~ 318086 (+)
CI01000222_00328639_00330158 NA coding downstream 59459 328639 ~ 330374 (+)
CI01000222_00531504_00560379 NA coding downstream 261975 531155 ~ 560714 (+)
CI01000222_00584243_00585193 NA coding downstream 314821 584001 ~ 585218 (+)
CI01000222_00631228_00636853 NA coding downstream 362048 631228 ~ 636853 (+)
G394366 NA non-coding upstream 17680 241609 ~ 251264 (+)
G394376 NA non-coding upstream 26224 232863 ~ 242720 (+)
G394362 NA non-coding upstream 66055 202577 ~ 202889 (+)
G394348 NA non-coding upstream 75270 193458 ~ 193674 (+)
G394395 NA non-coding downstream 990 270170 ~ 270521 (+)
G394352 NA non-coding downstream 14818 283998 ~ 287078 (+)
G394396 NA non-coding downstream 18828 288008 ~ 288342 (+)
G394400 NA non-coding downstream 28708 297888 ~ 298123 (+)
G394401 NA non-coding downstream 29577 298757 ~ 298991 (+)
G394294 NA other upstream 120034 132044 ~ 148910 (+)
G394293 NA other upstream 156821 109188 ~ 112123 (+)
G394303 NA other upstream 226097 31433 ~ 42847 (+)
G394482 NA other downstream 192809 461989 ~ 462466 (+)
G394559 NA other downstream 481167 750347 ~ 752670 (+)

Expression



Co-expression Network