G394357


Basic Information

Item Value
gene id G394357
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 376128 ~ 382941 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU451734
GGAGATTTGAAAAAGAAAAAACGCAGAAAGAGAAATGATGAGACACAATACAAAACATCTCAAAAGAATATCACTGGAATGAAGGTTTATGAATGGGCAAGTGCTTTAGGACCCGCGCTTATATTAGAAAAGCTTTCCAGCGCTGGAGAGAACTAAGCGGGAAGGCCTAAAATTCCTTCTCATGTAAGTAACACTGGGTTTTGATTGTCTGGAGCTGCTGTGCTGTTGGCGATTAACAACAAACTCTTGTTTGTATTTAGACTCTTGTGTACTGTACATTCATTTTTTGTGCTTCCTTGTCATTCGTTCATCAACTGCGCCTTATTTTTCATGAAGCATTTTGTTGCACATCAGCTGTTATAAACAGACATCCACTCTTCTATTGCATGTGTAACAGAGGCCAGATAGTGAGAGTTGTGCAGGTAAACCTACCAGGTATCTTGTGATTCAAGATACACATACTGCATATAGACGCTAGAGAATGCGGTGTGTAGCGTCATTGTTAACGCACTCGCCTCGCATGCCAGTAGTGATCGGGCCGGGGTTCGAAACCGACTCGGAGCAGGGTGGTTAGGATTGGAGTGTGAGTTTTGGAGGTCGGAGCAATGAAGAGAGGGGTGGGTTGATTTCAAATATCAACAATGTCCAACAGCGTAGTTGAAAAAATGGATACCCCACCTTTAATAATACTATATTAGACACAAGCAATTATTTTTTCCTAAATAATTAATCGTATTGCCTATTGTAATAATTTTAATAGTTTTTAATAATAATAATAATTATTATTACTTAAAATATCACCATTACTACAATCATTATTAGGATTAATTATTTAAAATTATAGTAAAAATGATTATTTTTGTGATTTTAAATTACATTTTAAATTACATAAATTATTTTATTGACATGTTCTGTAAAATTCACCCAGCAGCATTCAACACTTGTGTCGTTGTTACTGACGTACCGGTGAGCGGCGAGGGTTTGCTGAGGGTGCTGTACTGATTGTGAACGTAGGGGGCGCTGTGATGGGAGCTGAAGGCCGAGGACGACGCCAACACCAACTCCTCTTTAATCAGGCACGCTTTCGGATGTTCTTCCGGTAGATCCACCAACCGCTGCTCCAACGACACTCGCAGAAGATCCAACCGCTGGGACGCTTCACTCAGACGACTCTGAGCCTAGATACACAAACAAACACTTAACGAACCTACGACAGGACGCAAACAAATGTCCATTTTGATTTCTCCTAAAGAGTTTTATGATGTGCACATATGTTTCTCACACCTCAGCGATGGCTTTCTTGTCCTGTGCTTTTCCAGCTCCTAGAAGTCTCATCATGTTTTTGGCGCCCTCGGCCATGGCGTGCTCCACGCGGTAATGATGCCAGAGCTCCTCGATACGCAGCTCCATCCCGCACAGATCCGGCTTACCTGCTTGTGTGTCATCTGTCTGTTCGGTGGCCTGTATGGCTTTACGGATCTGCATACGGATAATGTCGATTTTCGTCTTACTGTCCTGCAGCATCTGCTGAGCCGACTGAAGCAGCTTCTTATCCTTGGTAACCCCATTGGCGTAGATGGGGATCATGTTCTCTGCCCCCTGTTTGACCTTCAGTTCGATGTTGAGCTGTCGCTCCAAAGCCTTAATCCTGTCCTGATTGGCTGAGGAGCGACTTGGTGTCCTGACAGACTGAAGGTCATCTGGGGGTCAAAGACAGGGTCAAACATTCAAATGGGGTCATGGTCTAACAGGATTATGAGGACTCTAAATATGTACAGTTTGCAGTATGTTCACAACCAATCACATCATCCCTGAAGATTCATATTCACTCATTAATAATGATTAATTTTATACTAAACTCATAATTCTTAAACATTCAAAGTGAAATAACATAGTGCTTTGATAAAACTGGAGTACTGGCCGTTTAAAGGTTAGATAATAATGGTGACCCCTGACCTTTGCTGTCATCGTGACCCTTGATCACGATGTGGGCGTCCAGCTCTTGCAGCTGAGTGTGGAGTGAGTCCAGCTTGCGGCTGGAGCTGCGTAATTGGCTCTCCACCTGATGGGCATTGCGTTTGTCAGTTGTGGCCCGCCGCAGGTTCTCCGCACCCGCTTTTATCTTCAGCTCTTTCCGGATCTCCCTCCGGATCTTCTCGCGCTGCTCGTCCAACCGCTGCTGCACGCTGGAGTCTGAGAAATCTGAGTTCTGGTCCAGACCCAGCTGCTCCAGGACGGACAAACCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU451734 True 2247 lncRNA 0.44 3 376128 382941

Neighbor

gene id symbol gene type direction distance location
CI01000222_00328639_00330158 NA coding upstream 45754 328639 ~ 330374 (+)
CI01000222_00315211_00317790 NA coding upstream 58042 315211 ~ 318086 (+)
CI01000222_00255680_00256841 NA coding upstream 119282 255612 ~ 256846 (+)
CI01000222_00232414_00239331 NA coding upstream 136718 232198 ~ 239410 (+)
CI01000222_00214433_00217905 NA coding upstream 158209 214433 ~ 217919 (+)
CI01000222_00531504_00560379 NA coding downstream 148214 531155 ~ 560714 (+)
CI01000222_00584243_00585193 NA coding downstream 201060 584001 ~ 585218 (+)
CI01000222_00631228_00636853 NA coding downstream 248287 631228 ~ 636853 (+)
CI01000222_00695056_00696916 NA coding downstream 312115 695056 ~ 697046 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 388921 771862 ~ 787590 (+)
G394359 NA non-coding upstream 13449 360905 ~ 362679 (+)
G394417 NA non-coding upstream 54313 321477 ~ 321815 (+)
G394413 NA non-coding upstream 65564 310331 ~ 310564 (+)
G394401 NA non-coding upstream 77137 298757 ~ 298991 (+)
G394459 NA non-coding downstream 32897 415838 ~ 451797 (+)
G394460 NA non-coding downstream 43489 426430 ~ 427208 (+)
G394477 NA non-coding downstream 74893 457834 ~ 458047 (+)
G394478 NA non-coding downstream 75277 458218 ~ 459476 (+)
G394492 NA non-coding downstream 95520 478461 ~ 486219 (+)
G394294 NA other upstream 227218 132044 ~ 148910 (+)
G394293 NA other upstream 264005 109188 ~ 112123 (+)
G394303 NA other upstream 333281 31433 ~ 42847 (+)
G394482 NA other downstream 79048 461989 ~ 462466 (+)
G394559 NA other downstream 367406 750347 ~ 752670 (+)

Expression


Co-expression Network