G394477


Basic Information

Item Value
gene id G394477
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 457834 ~ 458047 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU451869
AAATAATTCAGTATGATTAATAATGAACTAATATTCCCAATATTTGAGTGTTCTTAGAATATCATGTTGTAAGCCTAGCAACATGAATGCAAAAACTTAAAGTCACTTTGAAATCAAAATGGACAATTCTTATTTATTATGGAATTTTGTAGTATTTATTATAAATAATTTATCCATAATCTTGAATCAAAGTAACTTCCCCTCACTCTTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU451869 True 214 lncRNA 0.26 1 457834 458047

Neighbor

gene id symbol gene type direction distance location
CI01000222_00328639_00330158 NA coding upstream 127460 328639 ~ 330374 (+)
CI01000222_00315211_00317790 NA coding upstream 139748 315211 ~ 318086 (+)
CI01000222_00255680_00256841 NA coding upstream 200988 255612 ~ 256846 (+)
CI01000222_00232414_00239331 NA coding upstream 218424 232198 ~ 239410 (+)
CI01000222_00214433_00217905 NA coding upstream 239915 214433 ~ 217919 (+)
CI01000222_00531504_00560379 NA coding downstream 73108 531155 ~ 560714 (+)
CI01000222_00584243_00585193 NA coding downstream 125954 584001 ~ 585218 (+)
CI01000222_00631228_00636853 NA coding downstream 173181 631228 ~ 636853 (+)
CI01000222_00695056_00696916 NA coding downstream 237009 695056 ~ 697046 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 313815 771862 ~ 787590 (+)
G394459 NA non-coding upstream 6037 415838 ~ 451797 (+)
G394460 NA non-coding upstream 30626 426430 ~ 427208 (+)
G394357 NA non-coding upstream 74893 376128 ~ 382941 (+)
G394359 NA non-coding upstream 95155 360905 ~ 362679 (+)
G394417 NA non-coding upstream 136019 321477 ~ 321815 (+)
G394478 NA non-coding downstream 171 458218 ~ 459476 (+)
G394492 NA non-coding downstream 20414 478461 ~ 486219 (+)
G394493 NA non-coding downstream 22203 480250 ~ 644995 (+)
G394486 NA non-coding downstream 115427 573474 ~ 583971 (+)
G394485 NA non-coding downstream 133223 591270 ~ 591853 (+)
G394294 NA other upstream 308924 132044 ~ 148910 (+)
G394293 NA other upstream 345711 109188 ~ 112123 (+)
G394303 NA other upstream 414987 31433 ~ 42847 (+)
G394482 NA other downstream 3942 461989 ~ 462466 (+)
G394559 NA other downstream 292300 750347 ~ 752670 (+)

Expression


Co-expression Network