G394478


Basic Information

Item Value
gene id G394478
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 458218 ~ 459476 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU451870
CGCGTACCTGCCCACTGACGTCTGCGGCAGAGCCAGATACTGCTCTATGGCGAAGTTGATGTGATCGTGGATGCTTTTCTGTGTGTGGATACACAGCGGCTCCTCAGAACCATCCAGATAGTCTCTCAGGAACAGATGCTTGAAGGAGTCGGTGTTCTCCTCCTTAAACGCCACCACCATCTGATTACTGAGACCAAACAGCACCAGCTGACAGAGACAGAGAGGTGTCAATACAGCAGTTAAGACATGCAGCGGCCTGGAAAAATAAATATTAACTATGTGCACTTAGATATTAAACTGACTGATGCTGCAGTTTTCATTTACTGTTGTCAATGCAGAAATACTCCACTTTCTGCCCCAAAACCTAATAATTACTACAGTAAAACTAGTAACTTAAGCAAAAAAAAAATAGTGTTAAAAAATGAACTAAGGGGCCGTTTACACAACACCGCTTTCAACATAAAATTGAAAACTTTTCATGCATTTTGTCCGTTCTTTTTCAGGACAACAGCGTTTTGGTGGCCTGAAAACGCAAACTTTTAATAAACGGGTTTAAAAGTGCGAGTTTTTGAAAGCGATACCGTTATCATCTCTGTGTAAACTACAAAAACTCAAATTTGTGAAAATAGTGGCGTCATGCATATTATGAGTTCAGTCTATAGGCACGTAGTGTTTCTTTACAAAGTGACATCGCCATCTACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU451870 True 703 lncRNA 0.41 2 458218 459476

Neighbor

gene id symbol gene type direction distance location
CI01000222_00328639_00330158 NA coding upstream 127844 328639 ~ 330374 (+)
CI01000222_00315211_00317790 NA coding upstream 140132 315211 ~ 318086 (+)
CI01000222_00255680_00256841 NA coding upstream 201372 255612 ~ 256846 (+)
CI01000222_00232414_00239331 NA coding upstream 218808 232198 ~ 239410 (+)
CI01000222_00214433_00217905 NA coding upstream 240299 214433 ~ 217919 (+)
CI01000222_00531504_00560379 NA coding downstream 71679 531155 ~ 560714 (+)
CI01000222_00584243_00585193 NA coding downstream 124525 584001 ~ 585218 (+)
CI01000222_00631228_00636853 NA coding downstream 171752 631228 ~ 636853 (+)
CI01000222_00695056_00696916 NA coding downstream 235580 695056 ~ 697046 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 312386 771862 ~ 787590 (+)
G394477 NA non-coding upstream 171 457834 ~ 458047 (+)
G394459 NA non-coding upstream 6421 415838 ~ 451797 (+)
G394460 NA non-coding upstream 31010 426430 ~ 427208 (+)
G394357 NA non-coding upstream 75277 376128 ~ 382941 (+)
G394359 NA non-coding upstream 95539 360905 ~ 362679 (+)
G394492 NA non-coding downstream 18985 478461 ~ 486219 (+)
G394493 NA non-coding downstream 20774 480250 ~ 644995 (+)
G394486 NA non-coding downstream 113998 573474 ~ 583971 (+)
G394485 NA non-coding downstream 131794 591270 ~ 591853 (+)
G394519 NA non-coding downstream 144764 604240 ~ 706056 (+)
G394294 NA other upstream 309308 132044 ~ 148910 (+)
G394293 NA other upstream 346095 109188 ~ 112123 (+)
G394303 NA other upstream 415371 31433 ~ 42847 (+)
G394482 NA other downstream 2513 461989 ~ 462466 (+)
G394559 NA other downstream 290871 750347 ~ 752670 (+)

Expression


Co-expression Network