G394492


Basic Information

Item Value
gene id G394492
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 478461 ~ 486219 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU451892
TGGACAATATAAATTTGTTATTCATCTGAAAACTGAACAACTGAAAAAACATCTGAAGTTATAATTTTATAATCAGAATATCGAAAGATAATTTCAAAAACAGACCCAACAATCTGAAGAATGTCCTGCATCTCAAATGGGTTTTCTCCAAAAATGTTGATCAAGGTCAGATTTCCAAGACCACCAACAAATGTGGCCAGTTCATTGTCATGATGACCCTCAGTATCAACAACCAGAATATAGTCAAAGTTCATCTGTGGTTTCATCTCGTTTGACACTTTGACCAGCTGCATGAAAGCTCCTCTGGTGCACCTGCCAGCACTGACGGCAAACTGGAGTCCAAACATGGCATTCAGCATGGTGGATTTCCCAGAGCTCTGAAGCCCTAAAACTGACAGCACAAAGACTCTCTGGTCTCCCAGTTTCTTGATGAGTTCATCTAGAACAGCAGAGATCCAGACGACAGGAACATGAGCAGCATCTCCATCCATCAGCTCCAGTGGAAATCCAGAGATCATCATCTCTGCTGCAAGCCTTGGGAGAGAAGAGAAGTGAACCTGCAGATCTTTCTTGTTCTTCTTCACAGATGAACATGATTCATAGATCTGACCGATCTCCCTCATGATGTGCTCCAAACCAAATGGTGCAGCTTGAAGTTCCTCAGTTTTTTTTCTCGAGTTCAGTTTGTTTAGCCTTGAGTTGCTCAGATTTATCAGTGTTCTCTTTCAGCAGTCAGATCTTTCTTCTCCAGTAAACTCATCATCTGCTGTGCTGCTTCTCTTCCTCTCCTGCAGTCTTCATCATCTTCCTCATCTACTCTTATATCTGAGTGTTTGGACACATCTTCAAATCTGAAAGTGGAAGATGATTCTGAGAGACAATCATTTATAGCTCTTCTGAGTTCTTCAGATACTTCTGACTAATTTCTGTCTTTAAAACTGAATTTGAATTTCCCTCTCTTAATCTCATTTACAGTACATTAACATCCATCGGGTGGATTTGCTCAGACTGACTTGTTCTTTGGTTTAACAAAGACATTGCTTTGAATATATCACCACTATCTTCAGATGAGTCATTGTGTCTTTGTTGTGTGTGATCCTGTTCACTGTCCTTATTGACATTAATGTATCTTGCTCTGTAGTCCATCATCAGTAGTTTTTGTATGAAAGTCTGAATCAGCTCCTCCTCAGCACAAGACTCATGGGACTGTAATGAATGCTCAGTTATCTGAAGAACATCTGCAGCTGTCAGTTTATTGTGGTGCCTGCCTTCAAGATGAAGTCTGTGAAATAAATCCTGTATTTTTTTTCTTCCAATATTTTCCTGCTGTAGGTGTTGATCTGAACCAACTCCTGCTGTTNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU451892 True 1363 lncRNA 0.40 2 478461 486219

Neighbor

gene id symbol gene type direction distance location
CI01000222_00328639_00330158 NA coding upstream 148087 328639 ~ 330374 (+)
CI01000222_00315211_00317790 NA coding upstream 160375 315211 ~ 318086 (+)
CI01000222_00255680_00256841 NA coding upstream 221615 255612 ~ 256846 (+)
CI01000222_00232414_00239331 NA coding upstream 239051 232198 ~ 239410 (+)
CI01000222_00214433_00217905 NA coding upstream 260542 214433 ~ 217919 (+)
CI01000222_00531504_00560379 NA coding downstream 44936 531155 ~ 560714 (+)
CI01000222_00584243_00585193 NA coding downstream 97782 584001 ~ 585218 (+)
CI01000222_00631228_00636853 NA coding downstream 145009 631228 ~ 636853 (+)
CI01000222_00695056_00696916 NA coding downstream 208837 695056 ~ 697046 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 285643 771862 ~ 787590 (+)
G394478 NA non-coding upstream 18985 458218 ~ 459476 (+)
G394477 NA non-coding upstream 20414 457834 ~ 458047 (+)
G394459 NA non-coding upstream 26664 415838 ~ 451797 (+)
G394460 NA non-coding upstream 51253 426430 ~ 427208 (+)
G394357 NA non-coding upstream 95520 376128 ~ 382941 (+)
G394486 NA non-coding downstream 87255 573474 ~ 583971 (+)
G394485 NA non-coding downstream 105051 591270 ~ 591853 (+)
G394519 NA non-coding downstream 118021 604240 ~ 706056 (+)
G394521 NA non-coding downstream 213565 699784 ~ 707290 (+)
G394544 NA non-coding downstream 229317 715536 ~ 715762 (+)
G394482 NA other upstream 15995 461989 ~ 462466 (+)
G394294 NA other upstream 329551 132044 ~ 148910 (+)
G394293 NA other upstream 366338 109188 ~ 112123 (+)
G394303 NA other upstream 435614 31433 ~ 42847 (+)
G394559 NA other downstream 264128 750347 ~ 752670 (+)

Expression


Co-expression Network