G394561


Basic Information

Item Value
gene id G394561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000222
NCBI id null
chromosome length 845821
location 758005 ~ 760127 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU451977
AGCAAATTACAAATACAATAGTAAATTAAATAGCCTAAACTCTTTTTTTCAGATAGAGTAAGTTTATTTAACATTTATTTAACATCTTTTGTTGTTTGATTAACATTAATGACAGACAGGTATTTAATTGGGCTGCTGAATGCATGTAATATACTGACACATATCCAGTTTTTACCAACCTGTTTACGTCCACTTAAGCCATAACCGACTGTATTCACGCGAGATACTCCACACGATGGACATTTTGACATCTGTGTGTGTGTATATTTGACGCAAGGAGATCTGATTGTTGTGTGTCATTCAACGCGATCCCGCCTTCACTAACTGCAAGTTAATCGATAAGGAATTGTGATCGGATTGTAATTTTGTGCTACGACGAGATTAGCTACCTTTGATTAGGCTGTAGGCTGAAATTGTATTCAACCCGCCAAAGTGGCTAGTGGGAGTGGCTGACTTACCCGCCACAGCTGAAATCTACCCGCATTTGGCGGGTTGGCGGGTGTTAATGTCAAGCCCTGTTTGCGTCAACATTTTATCATTAACATCCTTTTCTGGATATGTCGAGCTTTATAGTTTTGTCACAAAAAGGCATGCTCTTTTTGAAGTTTAAATTATTTAACAGATGCATGTATGAGGATTTAATTCTTGTTTTTTTTCCCCATCTCTTGAATCCAGTGTATTGAGATGTGTAGTAGAAATTGTTTTCTTATTATGATCTGACAAGAATCACAGAATAGATGTAGGAGTCTCATTTTTTTATCAATTCCATTAGATATATTGATCCAAACTCTCAATGACTTCTTGTTTTGAGTAGTTTCTCCATTCATCCGGTATCTTACCCTTTCCTTCAAATGTTTTAGTGTAGTATTTTTCCAGATGTTTCTGGAATCTGCACACAAACCACTTCCAGTAGGGCAGTTCAGAGAGGTCAGAGGTGATGCTCCAGTCTGCATAAACTCCTCCTGCTCTTCTGTATTCTCTCCAGGGGACATTATCATCTGAGGCATTGGGATAAAAAGATCGACTGCTTGCCACAGCTGATGTGCAGATGCTAGCGCTGTGATCTCCATCATGGTTTTCTATGGTGTTGGTGCAGGTGGCTTTACAGAACGGACACTGAACCCAACAGCACTGACACAAGTGATCAATCAGAAGCTCATCTGGCCTGAACTTATAGTCCAGATTTACTGGAAAGGTCTTTGTGTTAAATCTACTGATTATCATGTCAGACGTTATAACAGAAAGTTTGTCTCTTATCACATCTTCTAGGAGGTTGAAATCATCAACATCATCAAGTTTCACTCCACTGAGGTCTTTTTCAGAGAAGATCAGCACATCTGAGAGCTGCTGTGTGAAACTCTTCAACCACAAACCAACATCTCCTCTGTTCACCTGAACATGTTCAGTAGATTCATGTGCTGCTTTCATGATCTTCTGCTGCAGGAGTTCAATGTTCTTCTTCATCTTGGTGTCTCCAAGATGTGTTTCTCCAGTTTTGATCTATTTCCATTCAGTGATTCACAGTTTGTTCTCATTTCATCTGTCAGATCTCTGGCAGTCTTCTTGTAGACACTCTGCTCAATGGGCTCTTTGAGTTTCTGACAGATGATCTCACCAAAAATGGTAGGTGATGTTGCTCCATGACAGTATTTCTGGAAAATACTATAGTACTCTTCTTTCTTCTTCTCAACATATATTACAGGACTATTGGCATTTCTGAACATTTTGTGTTGGTCAGTGATCATCTTCTTTGCTCTCTTACAGGTGGAAAGAACCAAATCCCTGATGAATTCATTCTTGAAATCATATCTCACTGATCCTTCTTGAAGTTCTGTTATTCTCTTCTTGATGTAATCTGTGATTTGTTGAATAAATCTGATGTTGTAGCCCATCTTTGAAATGTTAAATGACATGATCATCGAGTCTGTATGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU451977 True 1933 lncRNA 0.39 3 758005 760127

Neighbor

gene id symbol gene type direction distance location
CI01000222_00695056_00696916 NA coding upstream 60959 695056 ~ 697046 (+)
CI01000222_00631228_00636853 NA coding upstream 121152 631228 ~ 636853 (+)
CI01000222_00584243_00585193 NA coding upstream 172787 584001 ~ 585218 (+)
CI01000222_00531504_00560379 NA coding upstream 197291 531155 ~ 560714 (+)
CI01000222_00328639_00330158 NA coding upstream 427631 328639 ~ 330374 (+)
CI01000222_00772007_00787456 UBN2B coding downstream 11735 771862 ~ 787590 (+)
G394544 NA non-coding upstream 42243 715536 ~ 715762 (+)
G394521 NA non-coding upstream 50715 699784 ~ 707290 (+)
G394519 NA non-coding upstream 51949 604240 ~ 706056 (+)
G394493 NA non-coding upstream 113010 480250 ~ 644995 (+)
G394559 NA other upstream 5335 750347 ~ 752670 (+)
G394482 NA other upstream 295539 461989 ~ 462466 (+)
G394294 NA other upstream 609095 132044 ~ 148910 (+)
G394293 NA other upstream 645882 109188 ~ 112123 (+)

Expression


Co-expression Network