CI01000225_00111148_00126263


Basic Information

Item Value
gene id CI01000225_00111148_00126263
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 110001 ~ 128097 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000225_00111148_00126263.mRNA
AGGTTCTTATTTTAGACAGTTTAATCACAATTGTCTAGACAGGCTGTTGCACTTCTGAGCTACGCACAGTCCAGTTCATCTGTCTGAGGCGCTCGCTCGCCCCCTCCACAGCGCTCTGTCGCAGGGTTATATCAGTCTCTGCACCGGTCTCAATCTGGCCCCGGGCGTCTGCGCTGCTATGTATGCAAAGCAGTTCGCAGATCACATGATCAGAGTGACGGAACAGCATCTCTTCTCCCAAACACTGTGGCCACTGCCTGGCGTCCCAGAATACCTACACAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAAAATGAATTCGGCTAGGGTCGTCATCATTGACGTCTGTGTCTCTCTCCTCCTACAGCTCTGGTGCTATGACAACAACGCTGCTGCCTTCCCACCAATCACACCTCTATCTTCACAGAGACATAAGCATGCTGTTCTGTCCAAATATTTAAGATTTAACCTCTTCGGCTGGGTATTGTGGCATGTGATAGATGTTTTTTTGTAGATTCCAACACTAGATGTAATGTAAGGTCATGATGGGTGAATATTACAAAACATTTTTAGGGCCCGAACATGTCTGGGTCATATTTTTACCACAAAATCAAAAGAAAAAAATACTAAATTATATTTTGCATGATGAAATGGAATCTATTTATAGATTTATTGCATTTTGACATTATTTTAATGACAGTTAAGCACATATTTCCTCCGTATTCTCATTACTATAATTCAATAAAAATATAATTTTCATTATTTTTATGTGAAAGCAAAAATTATATATTATTTAAAATATTTGTGCATGGTAGAATTTGTGTTGCTTTTATTAAATGTATTAAATAATGTTGATTAAAATCATTAAAAAATCATTGTATTTCAATAATCTATTGACAATAACAGAAATTACAGAAAAATCATCAAAAATAAAATGTCCAAGACATATGTTAGTAATGAGAAAATGATGTTTAATTGTCATTAAAAAAATATAATAAAAAAAATGTATTATGCTTCTAAAGTCAGTATTATAATTAATATTTTTTTCTTTTTATTTAGTGATTAAATGCCTCCTAGACACTTTTTCTTTTCTTTTTTTTTTTTTTTTGGTGGGATGCACTTTTTATTTTGTAGACTTTTGCAGACTTTATTTGGCAGAAGTTGCCCATGGGTAGGCGGAGCTCTGCGGTTAAGGTGTGAGAAGTGGGCGGGGTCCGTGTTTGTGAGAGGCGGGTTTGAATTCTTGTGTAAATTTGATGCTCTCCGCAGGCTCATACCAGAGCCGTTCAGACAGACCAAAAGGAGCAGAACCACACACATTCCTGCTCCCAATCTCACAGTGATTCCGAGGCAGAAGGAAAGGGGGAAGGGGAAGGAGGTAAAGAGAGTGTGGGAGAGGGGAGGAGAAGATTGGTGAGAGAAGAGGGGGGGATCGTTGAACGGACACAGCCCCCCATCCCAAGCTGTTTCAGTTCCCGTCCACTCACGTGGGAGTCAGTATGTTGTGGAGTTTGAGACGGAATGTGGATGCCGCTGCAGGAAACATGCAATTTTAGAAAGGACGTGTGTCATTGGGTCACAGGATCGCCCCCCTGGGAAGGTCTTCTGTGTGTCTGGATATTGAGTCGACCTGTCACTCGAGGGGATCCTCTGAAAGACCTGTCAATCATTCGTCACACCACAGTGACCTCCCTGCACAGTTTTTCCAGAGGCACATACTTTAAAATCATAAAATGTTCTTATATTTCTAAACCTCATCACACTGGCTGTGTGTTTTATGTTGCATTCGGTGTCTCTTTCAGGCAGATGGTAAATCTGTGCTGTTTTCATTATTGCTGCAATACCCCTCCCGGCGTTTCTCAATTAAACGTTTCTACAGCTTCTGAACTAATTCAGCAAGCAACACAGACAACAAAACAGCATTACAGGTGCATTGTGGGTATTACTAGAATGGCTTGTTTCCAGACCATCTCCAATATCACGCTCTTAAAAACATCTCGTAAAAGAGGATCACCCCTGGAGCATGTCACAAAAACATCACACTTATCCTGGCATGTTTTGTTTCCAGCTGCCTCTGAGCGTTCTCCAGCTCCCACGCTAAGAAACGCACGTCAGGTTGAGCTTTGGGGCAAAAGGTCATGGTATGTCTCTAATGTGTGTTCAGGGGACTCTAATAACAAAGGACAGCAAAATACACCTGTCACATTTTTTGGAAGATTTGCAGGGATCATATCAGCTAAAGCAGGCCGTTATTCACAGAGAGGATATTTCACACTGGAGCTCATCTCAATAACTGTTGATAAAACAAACATGCTTTGAATATGAATGAGTGTGGTAGGTTTGCATTTGAGTTTACTGCTGTCTTCAACTTGTTTTTGGTGGCATATAAATGAGAGGACCAGTAATGAGCTGGTTAACAAGATTTTGTAAATATAATAAGGTCCCATTAGTGCAGCAAATAACATTAAAGGATTAGTTCACTTCAGAATTAAAATTTACTGATAATTTACTCACCCCCATGTCATCCAAGATGTTTATGTCTTTCTTTCTTCAGTCAAAAGTAATTAACTACGTCACGCATGACCTTTCCAACGTGATTACGTGATGTGTGGTGCATCACAGAGATAGTGCAAGATGAACATTAGTGGTTAAAAAGTATATACATTTTTATTTTTTTAGAAAATGATGATTGTTTCTCTAGATAAGACCCTTATTCCTCGTCTGGGATTGTGTAGAGCCCTTTGAAGCTGCACTGAAACTGCAATTTGGACCTTCAACCTGTTGTACCCCAGGGAAGTCCACTATATGAAGAAAAATCCTGGAATGTTTTCCTCAAAAACCTTAATTTCTTTTTGACTGAAGAAAGAAAGACATGAACATTCACCACTGGGGGGCGTGACTTTGCCAGTTTGATACACGCTTCGAACCACTGATTCAAAACAAAAGAGATTGGGAGTCAGTGCCGAGGCGTTGTTTGTGAACATGATGGTTATTATAGTCATAGACTAAATGTGAACATGCATGACATGGGGGTGAGTAAATTATCAGGAAATTTGAATTCTGAAGTGAACTAATCCTTTAACTAATAAGGAGCAATACATTTGTTACAGTATTTATTATTCTTTGTTAATTTTAGTTAATAAAATATACAACTCTTCATTGTTAGTTCACGTTAGCTCAGATCCATGAAATAATAATTATTTTTGCGAGAGGTCCCGTTTTCAAATCCCGTACGAGCCCCCATTTGTGTTAGTAAATGATTTAGCATGGTGCTTTGAAGTTGCTAGAGTGTTCTGGGTGGTTGCTAGGGTGTTGCTAAGGTATTCTGGGAGTTTTTAGAATGTTGCTTAGAAGTTGCTAGAATGTTGCTTTACAATTGCTTACATGTTCAAATCACTAACCCTGTCATTGGTATGAGTACTAGTAAAAGTGGTGCTTGACTTAGCAAACATTCCTGATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000225_00111148_00126263.mRNA False 3469 mRNA 0.39 6 110001 127787

Neighbor

gene id symbol gene type direction distance location
CI01000225_00052354_00104366 TIAM1B, TIAM1 coding downstream 3850 52092 ~ 106151 (-)
CI01000225_00044417_00045162 NA coding downstream 64839 44255 ~ 45162 (-)
CI01000225_00041381_00042262 NA coding downstream 66885 40999 ~ 43116 (-)
CI01000225_00035782_00036621 CLDN8 coding downstream 73380 35116 ~ 36621 (-)
CI01000225_00031098_00032138 NA coding downstream 77863 30596 ~ 32138 (-)
CI01000225_00166452_00178904 NA coding upstream 36482 164269 ~ 178904 (-)
CI01000225_00195825_00204991 SGPP2 coding upstream 67922 195709 ~ 204991 (-)
CI01000225_00383340_00392393 NA coding upstream 255300 383087 ~ 392393 (-)
CI01000225_00393863_00402338 NA coding upstream 266076 393863 ~ 402538 (-)
CI01000225_00404519_00407448 NA coding upstream 276588 404375 ~ 408629 (-)
G395114 NA non-coding upstream 59055 186842 ~ 187202 (-)
G395123 NA non-coding upstream 65523 193310 ~ 194560 (-)
G395142 NA non-coding upstream 92677 220464 ~ 234314 (-)
G395150 NA non-coding upstream 121434 249221 ~ 249430 (-)
G395330 NA non-coding upstream 285956 413743 ~ 414066 (-)

Expression


Co-expression Network