G395330



Basic Information


Item Value
gene id G395330
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 413743 ~ 414066 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU452981
ACACACTTCTAATGCTTTCAGAAAGTGTTCTTGTATACGTGGTTTATGAGGACACAAATGTGTATAATGACATGGGTATTACAACATAAACATGGTTTATGAGGACACTTCCTGTGTCCTCATAAACCATGATGGGAAGGTTTAGGGGTAGGGGTAGTGTAGGGGGATATAATATACAGTTTGTACAGTATAAAAACCATTACGCCTATGGAGAGTCCCTGTAAACCACATATACAAGTGTGTGTGTGTGTGTGTGTGCACACACACGCTTTCATGTTTTATGGGGACATTCCATAGATAATGATTTTTATATTGTACTGTAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU452981 True 324 lncRNA 0.38 1 413743 414066

Neighbor


gene id symbol gene type direction distance location
CI01000225_00404519_00407448 NA coding downstream 5114 404375 ~ 408629 (-)
CI01000225_00393863_00402338 NA coding downstream 11205 393863 ~ 402538 (-)
CI01000225_00383340_00392393 NA coding downstream 21350 383087 ~ 392393 (-)
CI01000225_00195825_00204991 SGPP2 coding downstream 208752 195709 ~ 204991 (-)
CI01000225_00166452_00178904 NA coding downstream 234839 164269 ~ 178904 (-)
CI01000225_00425270_00431446 PXYLP1 coding upstream 10533 424599 ~ 431446 (-)
CI01000225_00553926_00616121 NA coding upstream 139860 553926 ~ 616121 (-)
CI01000225_00724320_00725003 NA coding upstream 310235 724301 ~ 725468 (-)
G395150 NA non-coding downstream 164313 249221 ~ 249430 (-)
G395142 NA non-coding downstream 179429 220464 ~ 234314 (-)
G395123 NA non-coding downstream 219183 193310 ~ 194560 (-)
G395114 NA non-coding downstream 226541 186842 ~ 187202 (-)
CI01000225_00111148_00126263 NA non-coding downstream 285646 110001 ~ 128097 (-)
G395333 NA non-coding upstream 2236 416302 ~ 416743 (-)
G395335 NA non-coding upstream 4248 418314 ~ 418574 (-)
G395314 NA non-coding upstream 5288 419354 ~ 419651 (-)
G395341 NA non-coding upstream 39181 453247 ~ 454400 (-)
G395347 NA non-coding upstream 46109 460175 ~ 460425 (-)

Expression



Co-expression Network