G395335



Basic Information


Item Value
gene id G395335
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 418314 ~ 418574 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU452986
AGCAACACCATCGAGGCCTTCACTGGGTCTCCAGTAAGATTAATAAACGATTGCCTTCATGACTGTGTCTTCATAAAAGGCTTTCTCAGTTCTGTGCATGTGTGTGTGGTCACATCTGTGATGCTTCACTCACTGCTCTGTCATAACATTTTCTTCAACCTGATGTTTCCTCCCTCAAAAACAGATCCTAAAACACGAATAGGTCTCCACACACACACACACACACACACACACTTAAAGGGTGCAGAGAGCTATGGAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU452986 True 261 lncRNA 0.44 1 418314 418574

Neighbor


gene id symbol gene type direction distance location
CI01000225_00404519_00407448 NA coding downstream 9685 404375 ~ 408629 (-)
CI01000225_00393863_00402338 NA coding downstream 15776 393863 ~ 402538 (-)
CI01000225_00383340_00392393 NA coding downstream 25921 383087 ~ 392393 (-)
CI01000225_00195825_00204991 SGPP2 coding downstream 213323 195709 ~ 204991 (-)
CI01000225_00166452_00178904 NA coding downstream 239410 164269 ~ 178904 (-)
CI01000225_00425270_00431446 PXYLP1 coding upstream 6025 424599 ~ 431446 (-)
CI01000225_00553926_00616121 NA coding upstream 135352 553926 ~ 616121 (-)
CI01000225_00724320_00725003 NA coding upstream 305727 724301 ~ 725468 (-)
G395333 NA non-coding downstream 1571 416302 ~ 416743 (-)
G395330 NA non-coding downstream 4248 413743 ~ 414066 (-)
G395150 NA non-coding downstream 168884 249221 ~ 249430 (-)
G395142 NA non-coding downstream 184000 220464 ~ 234314 (-)
G395123 NA non-coding downstream 223754 193310 ~ 194560 (-)
G395314 NA non-coding upstream 780 419354 ~ 419651 (-)
G395341 NA non-coding upstream 34673 453247 ~ 454400 (-)
G395347 NA non-coding upstream 41601 460175 ~ 460425 (-)
G395340 NA non-coding upstream 43582 462156 ~ 522868 (-)
G395337 NA non-coding upstream 92315 510889 ~ 531490 (-)

Expression



Co-expression Network