G395341


Basic Information

Item Value
gene id G395341
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 453247 ~ 454400 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU453004
ATTGGGTTGGTTGCTGTTATTGCCGTGAACCCTGGAAAGATTAAGGTGCAATTTTACTAAGCTGGAAATGAATCCTAATCTTCACACACTGCACAATTAGCCACTTTCGTATACTTTCAGACTTTTTATAACAAACTACCATTCAAAAGTTTGGGGTCAGTAATGTTTTTTTTTTTTTGAAGAATTTAATACTTCTATTGAGCAAGGATGTGATGATAAAGGTGACAGTAAAGACATTTACTTACAAAATATTTCTATTTCAAATAAATGCTGTTGTTTTGAACATCAAAGAATTCTGAAAGAAATTCATCACAGTTTCCGCAAAAAAATTAAGCAGCAAACCTGTTTTCAACATTGATAATAATAATAAAAAGCAGCAAATCAGCATATTAAAATGATTTCTGAAGGATCATGTGAGACTTGTTTTTTTTTCTTTTCTTTTTTTTCTTTATTATCATTCAGAACTTGATTTAAAGTGTTCTGCCGTTTTGAAACTGGACAAATATTTGCTCAACTTAAACATTTTTTGCACAATGTTAGCATAGCTTATATTTGTTTTCATAGCCTTGAATTTGCACACTGTTTACAGGAAAACATCGGACAGTATGTGCAATAACATGTTTTTCCCATAAAATACAGAAATCATCTGATTAATCAATTAACAGAAGAAATAATCTCCCCATGTGATTCTCTTTTGAAGGACTTCCTGTCAATCACATGTCTTAAACAATGAAAAAGCAGCTAAAAGGTGTAAGAAAACTCTAGCATATGTAGTCTGAGAGTGTTAATCTAAATCCTCCTTGGCAAAAGTCCAGGTGACAGGTGAGAAGACACCAGCACACACATGCTCTCTTCTGGCCATGTGCCAGATCTGTGACATTTACTGTTAATCAGAGATAAAGCATGAAACATCAAAAGAGTTAACGTGTTAACCAGTCCCTATCTGAGCCCATCAGGAACGCAGTTGAATCACATGGTCAAATATAATGGAAGTTACCTGCGATCCCAGCAGATGTCATGTGCACCTGCGTGGAGTCTGGCTCAAACACACAGTTCAGTCTCTCCTTTGCACTGGAATAGGCTGCGAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU453004 True 1092 lncRNA 0.35 2 453247 454400

Neighbor

gene id symbol gene type direction distance location
CI01000225_00425270_00431446 PXYLP1 coding downstream 21801 424599 ~ 431446 (-)
CI01000225_00404519_00407448 NA coding downstream 44618 404375 ~ 408629 (-)
CI01000225_00393863_00402338 NA coding downstream 50709 393863 ~ 402538 (-)
CI01000225_00383340_00392393 NA coding downstream 60854 383087 ~ 392393 (-)
CI01000225_00195825_00204991 SGPP2 coding downstream 248256 195709 ~ 204991 (-)
CI01000225_00553926_00616121 NA coding upstream 99526 553926 ~ 616121 (-)
CI01000225_00724320_00725003 NA coding upstream 269901 724301 ~ 725468 (-)
G395314 NA non-coding downstream 33596 419354 ~ 419651 (-)
G395335 NA non-coding downstream 34673 418314 ~ 418574 (-)
G395333 NA non-coding downstream 36504 416302 ~ 416743 (-)
G395330 NA non-coding downstream 39181 413743 ~ 414066 (-)
G395150 NA non-coding downstream 203817 249221 ~ 249430 (-)
G395347 NA non-coding upstream 5775 460175 ~ 460425 (-)
G395340 NA non-coding upstream 7756 462156 ~ 522868 (-)
G395337 NA non-coding upstream 56489 510889 ~ 531490 (-)
G395356 NA non-coding upstream 82452 536852 ~ 537088 (-)
G395357 NA non-coding upstream 83333 537733 ~ 538115 (-)

Expression


Co-expression Network