Fish Transcriptome and Expression Database

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economic fish

G395622

Basic Information

Item	Value
gene id	G395622
gene name	NA
gene type	non-coding
species	grasscarp (Ctenopharyngodon idella)
category of species	economic fish

Chromosome Information

Item	Value
chromosome id	CI01000228
NCBI id	null
chromosome length	640563
location	89030 ~ 89263 (-)
genome version	v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU453380
GCAATATGGCGGAATAAGTCCCGCCTTCTAAATAAGAGCCAATGACCGATTGGTAAAGTCATCGCGTCACTGTGACAAGTGATTTGAGAGTAAAAGATGAAATGAATCCGATGGCACTGGAATTTTTATATTTTACCATCTAGTGAAGGTGGTTTTCATACAAGTGTACCCCGATAAGTCTCTTATGGTTCAGAGCTTTTAATGTGAAAGTGGAAGATTTTTTTTTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU453380	True	234	lncRNA	0.37	1	89030	89263

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
CI01000228_00043461_00055521	NA	coding	downstream	31755	42481 ~ 57275 (-)
CI01000228_00030868_00037938	UBE2D4, UBE2D2, UBE2D3, UBE2D1, UBE2D2L, UBE2D1B	coding	downstream	51083	30340 ~ 37947 (-)
CI01000228_00017667_00028066	MANBA	coding	downstream	60486	17667 ~ 28544 (-)
CI01000228_00010653_00014937	NA	coding	downstream	74093	10480 ~ 14937 (-)
CI01000228_00002917_00006024	NA	coding	downstream	82898	1447 ~ 6132 (-)
CI01000228_00432311_00436091	NA	coding	upstream	342779	432042 ~ 436154 (-)
CI01000228_00450070_00487878	NA	coding	upstream	360789	450052 ~ 487878 (-)
CI01000228_00583846_00597205	NA	coding	upstream	493330	582593 ~ 597757 (-)
CI01000228_00600604_00621150	NA	coding	upstream	511291	600554 ~ 621150 (-)
G395598	NA	non-coding	downstream	783	77394 ~ 88247 (-)
G395618	NA	non-coding	downstream	20921	67762 ~ 68109 (-)
G395624	NA	non-coding	upstream	1224	90487 ~ 90752 (-)
G395641	NA	non-coding	upstream	38006	127269 ~ 131260 (-)
G395664	NA	non-coding	upstream	84322	173585 ~ 178953 (-)
G395703	NA	non-coding	upstream	221568	310831 ~ 312191 (-)
G395732	NA	non-coding	upstream	239959	329222 ~ 329431 (-)
G395702	NA	other	upstream	299110	388373 ~ 444838 (-)
G395711	NA	other	upstream	388779	478042 ~ 478937 (-)

Expression

Co-expression Network