G395706


Basic Information

Item Value
gene id G395706
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000228
NCBI id null
chromosome length 640563
location 412804 ~ 414244 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU453487
CATATGCATGCACAAAAATCTGTTCCATGTTTTGTTGCTCTTTTGCGTTATTTTAACGTGGCTGAGAGTGCAGTAATTGACCGTGATTAGCAAATAACCACCATTTGAGGAATTCGTTGAGCCACTCCCATTCTGATTTCAAAAGATTCCGAACCTCTGTTGTTCTACAGTGAATCTTCCACTGGGCTTAAAAGCCCCAAAATGGCAGAATCTGCCTTTGACACTCAAAATCCTTTAAACTGCCCGATCTGTCTGAATCTGCTTAAGAACCCAGTGACGACTTCTTGTGGTCACAGTTTCTGTATGGACTGTATTAAGAGGTGCTGGGATCAGGAAGCTAATCGAGGCGTTTACAGCTGCCCTACATGCAGGACGACATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU453487 True 382 lncRNA 0.43 2 412804 414244

Neighbor

gene id symbol gene type direction distance location
CI01000228_00043461_00055521 NA coding downstream 355529 42481 ~ 57275 (-)
CI01000228_00030868_00037938 UBE2D4, UBE2D2, UBE2D3, UBE2D1, UBE2D2L, UBE2D1B coding downstream 374857 30340 ~ 37947 (-)
CI01000228_00017667_00028066 MANBA coding downstream 384260 17667 ~ 28544 (-)
CI01000228_00010653_00014937 NA coding downstream 397867 10480 ~ 14937 (-)
CI01000228_00002917_00006024 NA coding downstream 406672 1447 ~ 6132 (-)
CI01000228_00432311_00436091 NA coding upstream 17798 432042 ~ 436154 (-)
CI01000228_00450070_00487878 NA coding upstream 35808 450052 ~ 487878 (-)
CI01000228_00583846_00597205 NA coding upstream 168349 582593 ~ 597757 (-)
CI01000228_00600604_00621150 NA coding upstream 186310 600554 ~ 621150 (-)
G395708 NA non-coding downstream 25826 385837 ~ 386978 (-)
G395761 NA non-coding downstream 48061 364349 ~ 364743 (-)
G395759 NA non-coding downstream 48978 363610 ~ 363826 (-)
G395757 NA non-coding downstream 50543 362042 ~ 362261 (-)
G395755 NA non-coding downstream 52708 359772 ~ 360096 (-)
G395767 NA non-coding upstream 433 414677 ~ 414974 (-)
G395790 NA non-coding upstream 94555 508799 ~ 509013 (-)
G395793 NA non-coding upstream 98781 513025 ~ 513271 (-)
G395711 NA other upstream 63798 478042 ~ 478937 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006125 ftr80 coding NC_007124.7 CM002897.2 33452096 ~ 33458790 (+)