CI01000229_00310413_00314707 (SURF4)


Basic Information

Item Value
gene id CI01000229_00310413_00314707
gene name SURF4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000229
NCBI id null
chromosome length 388777
location 310413 ~ 314934 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000229_00310413_00314707.mRNA
ACTGTTGCCTACAGTATTCTGTGGGATGTCAAATTTCTCATGAGAAATCTGGCTCTTGGTGGAGGTTTGTTGCTGCTGCTGGCCGAGTCTCGCTCTGAAGGGAAGAGCATGTTTGCCGGCGTGCCGTCGATGGGCGAAAGCTCTCCCAAACAGTACATGCAGCTGGGGGGACGCGTTCTGCTGGTGCTGATGTTCATGACGCTGCTGCACTTCGACGCCAACTTCTTCTCTATTCTTCAGAACATGGTGGGAACGGCTCTCATCATCCTGGTGGCCGTCGGATTCAAGACCAAACTGGCGGCGCTCACGCTGGTGGTGTGGCTTCTGGCCATCAACGTCTACTTCAACGCTTTCTGGACAGTGCCTGCTTACAAACCCATGCACGACTTCCTGAAATACGACTTCTTTCAGACCACGTCGGTCATCGGAGGCCTGCTGCTGGTGGTCGCTCTCGGCCCGGGAGGCGTGTCTATGGATGAGAAGAAGAAGGAGTGGGCCGAATGCATAAGACATTTGTGTCGTGCATCAGATGTGAACTCCGTACTCTACGCGTCTCAGTCGAGTTAGTCGTTCGTCTCGAGTCGCAGCAGCGACGGGGACGTTTAATTCTATTATTTTACAATCTTCACAGGCTGAGTAGGACGAGAGCTCCTATTCTTCAACTTGATTTATTGTCTTGCCCAAGTGTTTTCTGTTGATTATATATATATATATATAAAAAAAAAAAGTAAGTCATTATATTGATTTTTCAGAAGTTTATATTGTATTTTTGATTTTCAGATCATGGCGGAAAA

Function

symbol description
surf4 Predicted to be located in Golgi membrane; endoplasmic reticulum membrane; and endoplasmic reticulum-Golgi intermediate compartment membrane. Predicted to be integral component of membrane. Orthologous to human SURF4 (surfeit 4).

GO: NA

KEGG:

id description
K20369 ERV29, SURF4; ER-derived vesicles protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000229_00310413_00314707.mRNA True 794 mRNA 0.48 4 310413 314934

Neighbor

gene id symbol gene type direction distance location
CI01000229_00297413_00299522 NA coding upstream 10876 296985 ~ 299537 (+)
CI01000229_00285850_00289175 NA coding upstream 20641 285850 ~ 289772 (+)
CI01000229_00276495_00285291 CIZ1A coding upstream 25122 276495 ~ 285291 (+)
CI01000229_00161103_00173718 GOLGA2 coding upstream 136695 161103 ~ 173718 (+)
CI01000229_00122889_00158667 NA coding upstream 151708 122847 ~ 158705 (+)
CI01000229_00348539_00352001 NA coding downstream 33605 348539 ~ 352891 (+)
CI01000229_00380441_00386904 NA coding downstream 65133 380067 ~ 387037 (+)
G395889 NA non-coding upstream 3408 304235 ~ 307005 (+)
G395899 NA non-coding upstream 16411 228185 ~ 294002 (+)
G395898 NA non-coding upstream 53523 249865 ~ 256890 (+)
G395885 NA non-coding upstream 82680 227511 ~ 227733 (+)
G395884 NA non-coding upstream 83054 226867 ~ 227359 (+)

Expression


Co-expression Network