CI01000229_00380441_00386904


Basic Information

Item Value
gene id CI01000229_00380441_00386904
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000229
NCBI id null
chromosome length 388777
location 380067 ~ 387037 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000229_00380441_00386904.mRNA
CTATTAATAACAGCAGTCACAAAATGTTACATAATACATAAAAGATTTAAAAACAATAAATAAAAACAGTAGATTGATAAATTAATTGAAATGAAATGAGATATACATTAAATAAAATACTTGCTATTGAGTAAATTGTCAAGATCAGGTTATTTAAAAAATAAAATAAAATTTTAAAAACTCTATTAAATATATGTTGTACAGTAAAGTGCAGTGAACCGCTGTAAGAACCACGTGTGTGAAATCTCGCAGAGTCTCGTGTCTCTCTCACGTCTCGCGTTGTTCCTTCGACTTGTTTCCTGTTCCGGGGTCGGTAGTGTACGCTGTGTGTGTGTTTATGCGCTTGTGTGTGTCCGTGTGTGTGAGTGTGTGTGATGATGATGATGGCGGAGCTGGTGCAGGGACAGGCCTCGGTGGCTCAGGCCGGGATGAAGGCGGACGGATTCACGGACCCGTTCCACCGCGCGCGACAGATTGCTAAAATGGGTGGAGAGCAGATGCCCCACCTGAACAACTCGTCTCCAGTCGTCGATGCCTCGCTCTATGGCTATGGAGGGCAGAAACGCTCCCTGGATGAAGGAGGTCATGTATCAGTGTTAATGTCATCTGACTGTAATACACCAGGTAGGACAAATGTAAAATAACTGAGGATACAGTGAAGCTGAAATCAGTGCAGGACTTTATGAAGCTTTGACCTTTGACTGCGTTTTTCCGCACGAGGCATTGATCGGTGCTTCTGTTCTTGAACCGCTTGCGAAAGAGGTAGCAAACTTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000229_00380441_00386904.mRNA True 777 mRNA 0.43 3 380067 387037

Neighbor

gene id symbol gene type direction distance location
CI01000229_00348539_00352001 NA coding upstream 27176 348539 ~ 352891 (+)
CI01000229_00310413_00314707 SURF4 coding upstream 65133 310413 ~ 314934 (+)
CI01000229_00297413_00299522 NA coding upstream 80530 296985 ~ 299537 (+)
CI01000229_00285850_00289175 NA coding upstream 90295 285850 ~ 289772 (+)
CI01000229_00276495_00285291 CIZ1A coding upstream 94776 276495 ~ 285291 (+)
G395889 NA non-coding upstream 73062 304235 ~ 307005 (+)
G395899 NA non-coding upstream 86065 228185 ~ 294002 (+)
G395898 NA non-coding upstream 123177 249865 ~ 256890 (+)
G395885 NA non-coding upstream 152334 227511 ~ 227733 (+)
G395884 NA non-coding upstream 152708 226867 ~ 227359 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00019909 NA coding CM030127.1 CM030127.1 2611694 ~ 2617930 (+)
mexican tetra (Astyanax mexicanus) G44623 NA non-coding NC_035901.1 CM008304.1 23709562 ~ 23709981 (-)