G395884


Basic Information

Item Value
gene id G395884
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000229
NCBI id null
chromosome length 388777
location 226867 ~ 227359 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU453702
GGCAATTCTGACTTTATAACTCACAATTCTGACTTTATATCTCGCAATTCTGACTTTATAACTCACAATTCTGACTTTATATCGCAATTCTGACTTTATAACTCATATTTCTGACTTTATAACTCACAATTCTGGCTTTATTCATTCAATTCTGAGAAAAAAAAAAGTCAGAATTGTGAAATGAATTGTTTATTTTATGGCGGAAACAAGCTTCCATAAATTTCAGTCACCAAAAAACACAATTTTCTGGCTTATACAGAAGTTTGAAGATAGACACATTTTAACAAAGTTTGATGAATCACACACAGTCCCAAAACAAATGATTCATTGTCTCTTCAAACTTATTACAAAAGGAGCACATGGGGGAAATACTATTATTAAATTCATCTAGTTTTTAATTAACTGGGTAGCAATTGTGAATAATTTTAATAGAGACTTCAACAACTTTATTAAATTAAAAAAAAAAAAAAAAAAAAAAAAATCACCAAAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU453702 True 493 lncRNA 0.28 1 226867 227359

Neighbor

gene id symbol gene type direction distance location
CI01000229_00161103_00173718 GOLGA2 coding upstream 53149 161103 ~ 173718 (+)
CI01000229_00122889_00158667 NA coding upstream 68162 122847 ~ 158705 (+)
CI01000229_00052137_00112907 NA coding upstream 113928 50616 ~ 112939 (+)
CI01000229_00276495_00285291 CIZ1A coding downstream 49136 276495 ~ 285291 (+)
CI01000229_00285850_00289175 NA coding downstream 58491 285850 ~ 289772 (+)
CI01000229_00297413_00299522 NA coding downstream 69626 296985 ~ 299537 (+)
CI01000229_00310413_00314707 SURF4 coding downstream 83054 310413 ~ 314934 (+)
CI01000229_00348539_00352001 NA coding downstream 121180 348539 ~ 352891 (+)
G395883 NA non-coding upstream 2912 223216 ~ 223955 (+)
G395824 NA non-coding upstream 6839 218834 ~ 220028 (+)
G395880 NA non-coding upstream 10172 214918 ~ 216695 (+)
G395830 NA non-coding upstream 15487 209767 ~ 211380 (+)
G395878 NA non-coding upstream 19076 207591 ~ 207791 (+)
G395885 NA non-coding downstream 152 227511 ~ 227733 (+)
G395899 NA non-coding downstream 826 228185 ~ 294002 (+)
G395898 NA non-coding downstream 22506 249865 ~ 256890 (+)
G395889 NA non-coding downstream 76876 304235 ~ 307005 (+)

Expression


Co-expression Network