CI01000236_00055079_00065468 (HOOK2)


Basic Information

Item Value
gene id CI01000236_00055079_00065468
gene name HOOK2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000236
NCBI id null
chromosome length 65887
location 55079 ~ 65468 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000236_00055079_00065468.mRNA
ATGAGCCTGAATAAACATCAACTGAGTGATTCTTTATTTATCTGGCTGCAGACATTTCAGGTGCCGTCGTGTGCGAGCAAACATGAGCTGACCAGTGGTGTGGCCATCGCACATGTGCTCAACAAAATAGATCCATCCTGGTTTAATGAAACATGGCTCAGCAGGATAAAAGAGGAGGGTGGCACAAACTGGAGGCTGAAGGTCAGCAACCTCAAGAAGATTCTTCAGAGCATGATGGAGTATTATCATGACGTGTTGAGTCAGCAGGTGTCTGATGAGCACGTCCCTGACGTGAGTCTGATCGGTGAGATGGGTGACGTGACTGAACTGGGCCGTTTGCTGCAGCTGGTTCTGGGCTGCGCTGTCAGCTGTGATCAGAAACAAGATCACATTCAGCAGATCATGACGCTGGAGGAATCAGTGCAGCATGTTGTGATGACGGCCATACAAGAGCTGCTCACTAAAGAGCCTGTGGAGGCAGGATCTCCAGAGTCGTACGGGGACTTCGACAGTCAGTCCAGGAAGTATTATTTTCTGAGTGAAGAGACAGACGAGAGAGACTTCACGTCCCAGCGCTGCCGAGAGCTCCAGCAGCAGCTGTCCGTTCTGATGGAGGAGAAGTCCTCGCTGCAAGTGGAGGTTCAGTCTCTGCGGGAACGTCTGACTCACTGCGAGCCATCCGACGTCTCCTCCACCATCACCAACAAGAAGCTGCTGCTGCTGCAGAGTCAGATGGAGCAGCTGCAGGAGGAGAACTACAGGCTGGAGAGCAGTCGAGATGACCAGCGGGTGCGAGCAGAGGTTCTGGAGCGAGAGGTGAGCGATCTGCAGATGAGGAACGAGGAGCTCACCAGCCTCGCTCAGGAGGCCCAGTCCCTTAAAGATGAGATGGACATCCTCAGGCACTCGTCTGACCGTGTGAGCCGCTTGGAGGCAATGGTGGACACGTACAAGCGCAAACTGGAGGATCTGGGAGATCTGCGCAGACAGGTGCGACTGCTGGAGGAGAGGAACCACGTCTACATGCAGCGCACCTGCGAGCTGGAGGAGGAGCAACGCAGAGCAAACACCATCCGCTTGCAGCTCGACACCTACAAGAGACAGGCTCACGAGATGAGCGCTAAACACTCGGCAGAGGCCATGAAAGCTGAGAAGTGGCAGTTTGAGTACAAGAACCTCAACGACAAATATGAGACCCTTCTAAAGGAGCGAGAGAAGCTGATATCTGAGCGGGACACTCTGAGAGAGACGACTGAAGAGCTGAGATGTGCTCAAGTGCAGCAGCAGTGTTTAACAGATTCTCTGAGTGGAGATTCGGGAGCAGTTGGCAGCTTGGCGTCAGAAATCATGCCAACAGAGTTCAG

Function

symbol description
hook2 Predicted to enable dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization and cytoskeleton-dependent intracellular transport. Predicted to be active in centrosome and cytoplasm. Is expressed in blastomere. Orthologous to human HOOK2 (hook microtubule tethering protein 2).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000236_00055079_00065468.mRNA True 1364 mRNA 0.54 14 55079 65468

Neighbor

gene id symbol gene type direction distance location
CI01000236_00028650_00033061 NA coding upstream 20089 28606 ~ 34990 (+)
CI01000236_00000386_00001685 NA coding upstream 52783 386 ~ 2296 (+)
G396905 NA non-coding upstream 9128 45613 ~ 45951 (+)
G396903 NA non-coding upstream 13308 41437 ~ 41771 (+)
G396871 NA non-coding upstream 38468 16316 ~ 16611 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00008516 LOC106601330 coding CM030126.1 CM030126.1 3087180 ~ 3102783 (+)