XLOC_012263 (kif3cb)


Basic Information

Item Value
gene id XLOC_012263
gene name kif3cb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 37204229 ~ 37214196 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024165
AACAGAGTGTGGTCCACCTATCAGCATCCGTCCGCCCGTGAGCGCGCTCTGCCTATTGTCTGCGGGGAACAGGGCGTGTGCCGCCGGAGAGGGAGATGCGCGAGCCTCGCTGCATGGAGCGGTTTGTGATGCTGGCTTTGGACCACCAAGATGCTCTGCGCACACGTTTACATGGGACGGACGTGCATTTGCCGCATTTATAGCCTTTATGCGAATGAGTGTTTTCTGTCATCGCTCCTCGCGTCCTTATATAAAACAGCAGCATATTAAAGACGCGGATTTTTCATCAAAATGATGAAGAGAAACAGCCTATTGCGACCGCGCTCCATGTCGATTGGCAAGAAATCAGAGGCGGTGAAGGTGGTGGTGCGATGCCGCCCTCTAAACAAGAAGGAAGAGGCGATGAATCAGGAAAGAATTGTTGAAGTGGATGTCAGACTGGGACAGGTGAGCGTGCGTAATCCCAAATCCTCCGGAAGCCTCGTCAAATCATTCACGTTTGATGCCGTCTATGACGTAAGCTCAAAACAAAACGAGTTGTACGACTATGCATGCAAACCTCTTATTGACTCTGTTTTGCTCGGGTTCAATGGAACAATATTTGCATATGGGCAAACTGGCACAGGCAAAACATACACAATGGAAGGTGTGCCCACAGACCCCGAGACCAGGGGAGTCATCCCAAACTCGTTTCAGCACATATTTACTCAAATATCCAGGTCTCAGAACCAGCAGTATCTCGTGAGAGTGTCTTACATTGAGATTTATCAAGAAGAGATACGAGATCTCCTCTGCaaggacaacaacaaaaaactagaGCTCAAGGAAAACCCCGAGTTGGGCGTCTATGTTAAAGACCTCTCGTGTGTTGTGACCAAGAACATAAAGGAGATCGAACACGTCATGAACCTGGGGAATCAATCAAGATCTGTCGGATTCACCAAAATGAATGAGCGCAGCTCCAGGTCTCATGCGATTTTTGTCATAACTATTGAGTGCAGTGAAATGGGCATTGATGGTGAGGACCACATTCGTGTTGGAAAGTTAAACATGGTGGATCTTGCCGGTAGTGAGCGCCAAAGCAAAACAGGTGTGCAGGGACGAAGATTTAAAGAGGCTGCAAAGATCAACTTGTCTCTTTCTGCTCTTGGAAATGTCATTTCGGCTTTGGTGGATGGAAAGAGCACCCACGTCCCCTACCGGGATTCCAAACTCACGCGCTTGCTACAGGACTCACTGGGGGGCAATGCTAAAACCGTTATGGTGGCCACTGTTGGACCAGCTTCATGTTACTATGATGAGACTCTCACCACGCTGAGGTACGCAAACAGAGCGAAGAACATCAAGAACAAGCCAAAGATCAACGAGGACCCCAAAGATGCCCTGCTCCGTGAGTTCCAGGAGGAAATAGCCCGTCTGAAGGCGCAGCTCGAAGAACGAGGGATGCTGGCGAAAGAAAGAAGACGACAGAAGAGAAACAGCCTCAGGATGAAGAGGAGTATGAGTAGCGGAGAGGTGGAAACTCCGAGAATCGGAGAGGTAGAGGTTGTTGAGACGGTTCGGGAGGAAAGCGTGGAGGACTATTGGTGGAAGCAGCAGATGGCAAAGACCTCTGCCAATTACAAGCCAGATATTAGCAGGAAACTTGGCATGGTAAACGAGAAAGTAAAGACTGTGGAAGAGTTGCTGAAGGAGCAACAAGCTATGGAAAATATGATCGAAAAATACAAGgctatGGAAAGTAAGCTTCTGGTTGGAGGGAAAAACATCATTGACCACACCAATGAACAGCAGAAAATGCTGGAACTGACGAGGCTGGAGATTGCAGAGCAGGatagaaaagaaagagaaatgcAGCAGCTGATGTTTGAACAAGATGAAGAGACCATTGAGCTGAAGGAGACCTTCTCCACTTTACAGCAAGAGGTGGAATTTAAGACTAAGAAACTTAGAAAGTTTTACAGTAAGCTGCAGTTGGTGAGATCTGAGATTGGAGATATCATCAATGAACATGTCACAATGAGGCAGGAACTGGAGCAGACGATGAACGAGCTGACAAGAGAGATGAAATTCAAAAATCTGATCATTGAGAACTTCATTCCTCCGGAGGAAAAGAATAAGATCATAAATCGGCTCCACTTTGATAGCGAGGAAGACCAGTGGAAAGTTTTACCTCTTCTCCCTTCAGAAAATAACTCACCTCTCGTCCGACGAAGACCAACTTCTGTAGTGGGAAACAAGAGACCAGTTAGTATGTACGCTCAAACTGCCGTGGCACACGGGTCGCCTTCTAGATACAGGGCTGAGAACATCATGCTTCTGGAGCTGGATGTTTCTCCACCCACCATGGTGCCCTTGGACCTTCAGCGGTCGGATATAAGAACCCAAGACTTGATCCGTGACTTTGGCCATTACAGAAAGAGGACGACCGCGTCACGGGTCATGAAAGCCAGATCATGGTACCAAGGCCCGAGCCATTCTGCTTGTTCGTCTGCCAGCTGTGTGCCCTCGGACCCTCAATGCTCATCAGCCTCGGGAATGGAGGCGTGTGCGTCAACATACCAGCCATGACTCTGTACATATATAATGCCTGCAAGCATAGAAGCATAGAAAGCACTTAATTCTCATTCTTTGCACTGTTTTCATGAGCTTTAAACGATGCCGTCTGTCTTCTCCTCCATCTTTTTAGCATCAAAGCTTAGTCATTTTAAGCACAATTGTCTCCTGTATACTTGAAAAACgctagtgtgtgctgtttaaGCTTGTGATTATGTCTTTCCTGAACagaaatgcaaacaataaatGTATCATAAA

Function

symbol description
kif3cb Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Is expressed in central nervous system. Orthologous to human KIF3C (kinesin family member 3C).

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function
GO:0016887 ATPase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080709-4 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Is expressed in central nervous system. Orthologous to human KIF3C (kinesin family member 3C).

Ensembl:

ensembl_id ENSDARG00000079500

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024165 True 2814 mRNA 0.47 8 37204229 37214196

Neighbor

gene id symbol gene type direction distance location
XLOC_012262 asxl2 coding downstream 8875 37162571 ~ 37195354 (-)
XLOC_012261 dtnbb coding downstream 47709 37070096 ~ 37156520 (-)
XLOC_012259 dnmt3ab coding downstream 149270 36936918 ~ 37054959 (-)
XLOC_012260 BX571720.1 coding downstream 253674 36950438 ~ 36950555 (-)
XLOC_012257 dpysl5a coding downstream 267373 36898874 ~ 36936856 (-)
XLOC_012264 ptgr2 coding upstream 73656 37287852 ~ 37299394 (-)
XLOC_012265 CR382330.1 coding upstream 95133 37309329 ~ 37309446 (-)
XLOC_012266 si:ch211-180n24.3 coding upstream 96466 37310662 ~ 37312922 (-)
XLOC_012267 NA coding upstream 148828 37363024 ~ 37365357 (-)
XLOC_012268 crip1 coding upstream 171615 37385811 ~ 37395496 (-)
XLOC_012253 BX649242.1 non-coding downstream 528352 36673484 ~ 36675877 (-)
XLOC_012252 CR354585.1 non-coding downstream 569040 36635072 ~ 36635189 (-)
XLOC_012250 NA non-coding downstream 690293 36482587 ~ 36513936 (-)
XLOC_012249 NA non-coding downstream 727495 36446514 ~ 36476734 (-)
XLOC_012269 CR382330.2 non-coding upstream 175807 37390003 ~ 37390117 (-)
XLOC_012271 NA non-coding upstream 554445 37768641 ~ 37771340 (-)
XLOC_012273 NA non-coding upstream 808947 38023143 ~ 38026611 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000062_01447302_01452846 KIF3CB coding CI01000062 null 1446809 ~ 1452876 (+)