XLOC_012289


Basic Information

Item Value
gene id XLOC_012289
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 39864881 ~ 39866039 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024960
AGGGTCTGTTTCTCCATAGTCGTCTAAGTAGGGTGCTGGATAGGGACTGCCACGTGTCTTACTGGCCATCAAGACAATCTCACACTCTCGAACCCTgagaaaatgtttttttggttTCTCTTACCTGAGAAACAGTCCCACTCCAGCCCCACAGATGGCAGCGTGACCCGTACAGGCGCCCACTTCCTCGCCGTTGAGCTGCTCATGACAGCAGGAGCTCTGAGCACACAACATCACCCCACAGAGCAGACACAGAGTCGGGTGTTTTCGCTCGTCATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024960 True 279 lncRNA 0.53 2 39864881 39866039

Neighbor

gene id symbol gene type direction distance location
XLOC_012288 pimr62 coding downstream 78659 39783268 ~ 39786222 (-)
XLOC_012287 pimr61 coding downstream 84975 39776296 ~ 39779906 (-)
XLOC_012286 pimr60 coding downstream 91882 39768680 ~ 39772999 (-)
XLOC_012285 gpr132a coding downstream 103795 39760145 ~ 39761086 (-)
XLOC_012284 BX469926.1 coding downstream 223083 39641681 ~ 39641798 (-)
XLOC_012290 prph2la coding upstream 7545 39873584 ~ 39886628 (-)
XLOC_012291 NA coding upstream 143337 40009376 ~ 40022249 (-)
XLOC_012292 si:dkey-187k19.2 coding upstream 243020 40109059 ~ 40110782 (-)
XLOC_012293 LRFN2 coding upstream 345116 40211155 ~ 40512790 (-)
XLOC_012294 NA coding upstream 850877 40716916 ~ 40718108 (-)
XLOC_012282 NA non-coding downstream 317394 39500572 ~ 39547487 (-)
XLOC_012283 BX469913.2 non-coding downstream 332952 39531815 ~ 39531929 (-)
XLOC_012281 BX571670.1 non-coding downstream 715198 39149567 ~ 39149683 (-)
XLOC_012280 BX511307.1 non-coding downstream 877466 38987296 ~ 38987415 (-)
XLOC_012295 NA non-coding upstream 852876 40718915 ~ 40719383 (-)
XLOC_012296 NA non-coding upstream 863192 40729231 ~ 40739941 (-)
XLOC_012298 NA non-coding upstream 1032936 40898975 ~ 40903400 (-)

Expression


Co-expression Network