XLOC_012292 (si:dkey-187k19.2)


Basic Information

Item Value
gene id XLOC_012292
gene name si:dkey-187k19.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 40109059 ~ 40110782 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024199
TGTCAATAATCAAATGTCACATTCTAGCAAATGGGAATTATTTAAGTTTAAAGTTAGACAGTCAGCCATATATTTTAGTAAACAAGTTAAAAACAATAACTTGAATAAGGAACGGTCATTGATGAAcgagttaaatatttatttaaaaaaagataatctAACAGAGGATGAAAAAGTTAGATTAGAAACTATAAAATCTGAAATTGACCAAATTTACGTTGATACTGCAAAAGGTGCTTTTATTCGTTCAAGAGCCAAATGGTtagaaaatggagaaaaaaatacaaGTTACTTTTTTTCACTAGAAAAGCGGAATTATAAAAGGCAAATGATTTCCTCACTTAAAATTGATGATGTTATTACTTCAAATCCTAAGTTAATTTCAACATATGTAGAGTCCTTTTATTCCCAATTATATAAATCTGTATTTCAAAAGGataaatgttataatttttttgaatCTGTTAAATCTTCTGTCTCTCCTATTTCACCTCAATTTAAAGATACTTGCGAAGGAAATCTGAGTAAGCTTGAGATGGAAATAGCAATAcgttcaatgaaaaaaaataagtcTCCAGGCTCAGATGGTCTTTCAGTGGAGTTCTATCTGCATTTTTGGAATATAATTGAAAATCCTTTATTTGAAATGTATAAGGAATCTATTGAGCTAAAGGAGTTACCAACCTCTTTGAAACAAGGATTAATAACCTTGCTTCCTAAACCTAATAAAGACCTTATGATTTTAGACAACTGGCGCCCAATAACACTACTTAATGTGGATTATAAATTATTATCTTTGATTTATGCAAAACGCTTAAAGGAAGGTCTAAATGAAATTATTAGCGAGTATCAAACTGGTTTCATGGCTGGGCGACACATAAGTTGGAATATTAGATTGATTCTGGATTTGTTAGATTATTCTAATTTGATTGAGTCTGAAGCATTACTACTTTTTCTGGATTTTCATAAAGCTTTCGACACTATTGAGCACCAATTTATGTTTATGGCATTAAAATATTTCGGTTTTGGGGACAGGTTTATTTCTATTATGGAATTGTTTCATAGAGATATCAATAGCTCTATAAATTTATACCCAAATACTTCTAAAAGGTTCCCCATATGTAGAGGAGTCCGTCAAGGATGTCCTATTGCtccttttttatttcttcttgttGTAGAGTTCCTGtccatttatgttttaaaatcatCAGCAATTCAAGGTATTaccatatttaataaagaaataaggatATCTCAACTTGCTGATGATACCGTTCTTTTTCTAAAAGATAAAGATCAGTTACCTGCAGCTTTGCAATTAGTAAATGATTTCTCTATTGCATCTGGATTAACCTTAAATGTGACAAAATGTGAAATTATATCACTTTATAATTCTGAAGTAAAAAGTTTATGTAATATACCTGTTAAAAAGACGGtaaaatatttaggaataagTATAACAAAAAATTTATCAGAGAGACAAGATTTAAATTTTtcccctaaaataaaaaaagctcaaGGTATATTTAATAACTGGCTTCAAAGGGATTTATCTATTATTGGAAGAGTTTTGTTGACTAAAGTAGAAGGAGTGTCTAGATTTGTTTACCCGGCTTTATCCCTTTTTGTTCAAGAtgctatttgtaaaaaaattaatgatttatttatacaatttgttTGGAGAAACAGACATCATCATTTAAGAAAGGAAGTAATTCAAGGGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000086849

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024199 True 1724 mRNA 0.29 1 40109059 40110782

Neighbor

gene id symbol gene type direction distance location
XLOC_012291 NA coding downstream 86810 40009376 ~ 40022249 (-)
XLOC_012290 prph2la coding downstream 222431 39873584 ~ 39886628 (-)
XLOC_012289 NA coding downstream 243020 39864881 ~ 39866039 (-)
XLOC_012288 pimr62 coding downstream 322837 39783268 ~ 39786222 (-)
XLOC_012287 pimr61 coding downstream 329153 39776296 ~ 39779906 (-)
XLOC_012293 LRFN2 coding upstream 100373 40211155 ~ 40512790 (-)
XLOC_012294 NA coding upstream 606134 40716916 ~ 40718108 (-)
XLOC_012295 NA coding upstream 608133 40718915 ~ 40719383 (-)
XLOC_012296 NA coding upstream 618449 40729231 ~ 40739941 (-)
XLOC_012297 supt7l coding upstream 749234 40860016 ~ 40879108 (-)
XLOC_012284 BX469926.1 non-coding downstream 467261 39641681 ~ 39641798 (-)
XLOC_012282 NA non-coding downstream 561572 39500572 ~ 39547487 (-)
XLOC_012283 BX469913.2 non-coding downstream 577130 39531815 ~ 39531929 (-)
XLOC_012298 NA non-coding upstream 788193 40898975 ~ 40903400 (-)
XLOC_012301 NA non-coding upstream 1203623 41314405 ~ 41316816 (-)

Expression


Co-expression Network