CI01000258_00137907_00154325


Basic Information

Item Value
gene id CI01000258_00137907_00154325
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000258
NCBI id null
chromosome length 191677
location 135746 ~ 154356 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000258_00137907_00154325.mRNA
CTTCAAAAGGGGCTGAATTACTGCATGTTCACAGTAATCAGGCACAACCCCTGAAAGCAAACTCTTATTAATTATAGACAGTAAAAATGGGCCAACTGATTCGAAAACTTGCTTTAACAAATGGGTCGGAACAATATCTTGAGGAGAACTTGTAGTCTTTAGTTTATGCACAATGTCCTCAAGGAGAGAAAGAGAGATCGGCTCAAAAATCGGAGAAAGATGGTAGGCAACAAGAACAGTCCTCCCTAGGCTAGACCGTCCCATTTAACAACGCTCAGTCCGACCTTGCCGTCCTTCGAAAGCGATGCAGGATGCAGCCTCTGAATTGGGACACAGCTTTCATATGCACTTGTGGTCTTGTGGACTTACAATGGCCACTGTGTGCGCATGTCCGTTAAGTCCACAAGACCATAGCGTGTCCTATCCCAAATGGCACCCTAAACACTCATGGTCTTCCTACGAGTCCTCACTTTTGTGATGTAATGCCGCTTTGACTGTCAGGAATATTTCTTCTGCGGAGATCGCACCAGTGCAGGCTTGGCAAAAGTGCGCATCGAGGGCACGTTTTGCCGAGCCTGCAAGCCCACAAGCTCTACAGCAGACTTCTACCCAACAGTTAAAGCGGCTTTACGTCACAAAAGTCTGGACTCGGAGGAAGATCGCAAGGGCTTAGGCTTCTATTTGGGACAGGGCCAGGAGAGGATTTGTGAATGGAAGTAAAGCGACGCAACTGACACTGGTAGGTCACATGACAGACACTGACAACATGGCGGATATAGTACGTCCGAATTTCATTCATACATATTCATATAGGCTATATTATATAAAGCATACATTTTAAGGGTTGTGAAGTAAATTCAAATTCAAATGTAGTATCCACTCAGTACGCGATTTCGGACAGCTCCCTGCCCTGGTTTTCACAGTGCATTGTGGAACTTTTTAGGGAGAAATTGTTTCAGTGCACTGGAAGGATTTTGCGATTGATACAGCTCTTCAAATAGCAGACTCTCTGATTCCTGTCCTGACTTTATTGAGATGCACCTAGAGACTCAAGTACTAATAATAACCCTAACTAACTGTTGATATTTTATTTCTACTATTGTTGTATTTTTTCTTATATTTAAAAATCCTGTGATTATTAATATTATTAATATTATTACTATACGTAGACAATATGAACTCTTTTTTCATGCATTTGCATGAGATCTGAATCTGAGAGGATCATCAGCGCACAGCGCCCCTGTTGTACGGTATTTCTGTCAGGACCACTATTGTCAAATATAATTGATAATTGCATAGAGTTTGTATTGGCGGTATGGTTCTGTTCTGCAAGAACTCCCTGTGCATCCATGCAACCTAGCATGGATAATAGCAGGGAGAGCCATTCTGTTCTGTTTACCCATCCTAGGGTAAACAGAACAGAACCAACTTATGCAGATATAATTAATGTCAATAATTTAGCATAAACATATTTCAAGAATTAGTCTGATACAGGGGAATCATAGGTCAATCCTGACTGACGAGAGGAGGAGCTGGGGATGGAGCAGGGTAATTAGCTCCTGAGAAATGCGATAGCTGCTGATAATACTGAGGAGCTTATATATGGATGCTGTGATAGGCGTCGTATTCCTATAGGCAGACGGGAGTCACCTGGGAGTCAGCTGATGTGAGCTTGACTGATGTGACCTGACAGAACTGACGTTACGCTGGATATTAACCAGCTTTTTTATTAACTCTGTTTTTTTTTTCGGTATAATAGGCCACAAGAGAAATGTTAAGAAAATAAATTAAGACAGCTGTGTTATATACCGTCATCAGAACATGCAGATTTGATTAATGTAGCGTCAGATGTCAGAAGCTCGGTCCGTCTCTACTTTCACTTTCTGTGGTGAATGTTTTTGACTTCTTCAAATTTTGTGTACAAAATCATGGACATTTCGCGCGCGTTATTTCCAGTAATAATAAAATCAATCAAGTTATTGAAGATAAGAGTAAATAAACAAGACTGATCTCTTCCAATCAAAGTTTGACATGTCATTTCCTCATACAGAGAGGCTGTGCTAAAGTTAGGAAGTGTTTTGCTTTTCTTTTCACTAGTCCTACGTGTCAGATGTTCCGTGAAGACTCTCTATAGGCCTATTTTAATTTTTTCTGGCATTAAATGGCGCTTGAGGATGAGCTGTCGTGTCCCGTGTGCACTGAGCTCTTCAGTGATCCTGTGTTGTTGAGCTGTGGTCACAGTTTCTGCCGTCGGTGCATTAATGATCACTGGACCTCGAGTAGATCCAGAAACTGTCCCGTCTGTCGACAGGCATCACCGCAGCCACCGGTGTCCAATCTGAGCCTGAGGAACACCTGTGAGTCTTACCTGAGAGAGCAAAACACGAGGAAAGAGAGGGATGGAGGACAAGAGTGTCAGATACATGGAGAGAAAATTGAGCTGTTCTGTCAAACAGATGAACAGGCTATATGTGTAACATGTAAGCAAAACGAACACAGATTTCACAAAACACAAACGTTACAACAGGCTGTTCGACAACGAAAGGAGAAGCTGAAAGCAGCTCTTCGTCCAGCTGAGAAGACATTGTGGTCATTACAGAATGGTGCAGCACAAGACGCCAAGATCTCTAATTACAATCAGAATTACAACAGCATTATGAACAGAGCTAAATACACACTTCCAGAAGCAGAACTGAGTTCAGAAGCTCTTATTGATCTTACCAAACATCTGGGTAACTTGAAGTATCAAGTATGGGAGAAGATGAAGGACATCTGCCCTTACTACCCTGTGATCCTGAACCCAAACACAGCTCCACCAGACGTCTCTGTGTCAGATGACCTGACCTCTGTGACATCATGTGCGTACCGACAGGACGAGCCCAACCCTCTTCTTCTGCACAGGAACCGTATGGTGTTGGGGAGTGTGGGATACAGTTATGGTGTTCACTCATGGGATATTGATGTGGGAAACAGTCGCAGCTGGAGCCTTGGAGTGTGTCTTGGATCAGTGGAAAGATCTATTGTGCAAAGTTTGAACTCTGCAAATGGCTTCTGGGGTCTCAGACGTGATGGAGACTTGTACAAATTCCTGAACACTACAATTGCGTTCAAGATGAAGACTCATCCCCAAGTGGTGCGTGTGAAGCTAAAGGATTGTTTTGACAAAAAGGGAGGATGGTGGAGGAATGTGAGTTATTTTGATGCTGCTTGTAATTCCCTTTTTGCCTGTTTTCAAGTGCCCTTAGGGATTGAGCTCTTTCCATTCGTGATCCCAGAAAAGCGCTCCGGCCCACTGCGTATCATCCCAGCTAAAGTTACTCTGACAACTGAACATGTTGAACACATTGAACAGGAGATCTCTTTTCCAGAGAAACATTGTTTCTTACCGAAGAGAGAGGAGAAGGTCACTGCCTCTGAAACAAAATGTGATGAACCCATGAAGAATCTGCCCTCTGCCTTCAGTGATGCAACAGTGACCTCTGACCCCAGCAGGGTGAAGAAAGAGAGATCAGAATCTCCACAACCCAGTTGTTCATCTGTGATGAGTGACAGTTCTATGATGAATCCTCCTTTATTGAGTGGTGGACCAGAGACCTTTGACCCCAGTATCAGCAGGAGGAAGAGACCGAGATCAGAGTCCCCAGAACCCAGTGGTGCGTCTCTGAAGAGTAGCACATCCATGAATCGACCCCCTCTATTCAGTGATGGACCAGTGACCTCAAATCCTTCGTTAGTATAAACTTGTACTTAAATTACTGTTGTGAATAACA

Function

NR:

description
Si:dkey-44k1.3 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000258_00137907_00154325.mRNA False 3770 mRNA 0.43 8 135746 154356

Neighbor

gene id symbol gene type direction distance location
CI01000258_00096312_00110058 NA coding upstream 24589 96312 ~ 111157 (+)
CI01000258_00045044_00048458 NA coding upstream 87288 45044 ~ 48458 (+)
CI01000258_00042250_00044020 NA coding upstream 91309 42250 ~ 44437 (+)
CI01000258_00038193_00041078 NA coding upstream 94422 37596 ~ 41451 (+)
CI01000258_00028166_00032821 NA coding upstream 102125 27921 ~ 33621 (+)
G400530 NA non-coding upstream 13615 119312 ~ 122131 (+)
G400561 NA non-coding upstream 22706 111265 ~ 113040 (+)
G400539 NA non-coding upstream 72235 44785 ~ 63511 (+)
G400544 NA non-coding upstream 80482 54784 ~ 55264 (+)
G400521 NA non-coding upstream 92161 41355 ~ 43226 (+)
G400533 NA other downstream 2093 156449 ~ 158626 (+)

Expression


Co-expression Network