G400539


Basic Information

Item Value
gene id G400539
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000258
NCBI id null
chromosome length 191677
location 44785 ~ 63511 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU459805
GATCTGATCCAGCTACATCAATCATGCTACAGGCTGCAGCGAGGACTTGGACAAAACACTTCACAAAAAGAAAAGAGTTGGAAAAAGCACTCTTACCAGCCACAGACGGCTACCGCTCGCGCACACACTCACCACGCTCCGCCCACTCACTCCCAGCATGCAAGAGAGAGAGAGAGAGAGAGAGACAGAGAGTGAGTGCATGTGTGAGAAAGAGAGAGAGAGTGTGTGAGAGAGAGAGCAGCTCTTCATTAAGTCTGTCCACCAGCAGCACACAGATAAAGCAGAATGATCCACATCTGTGATCATAAACTTCTCATATTTAACCTGCTGCTCATCATGTCAGGTAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU459805 True 349 lncRNA 0.48 2 44785 63511

Neighbor

gene id symbol gene type direction distance location
CI01000258_00042250_00044020 NA coding upstream 348 42250 ~ 44437 (+)
CI01000258_00038193_00041078 NA coding upstream 3461 37596 ~ 41451 (+)
CI01000258_00028166_00032821 NA coding upstream 11164 27921 ~ 33621 (+)
CI01000258_00000064_00004613 NA coding upstream 39344 64 ~ 5441 (+)
CI01000258_00096312_00110058 NA coding downstream 32801 96312 ~ 111157 (+)
CI01000258_00137907_00154325 NA coding downstream 72235 135746 ~ 154356 (+)
G400521 NA non-coding upstream 1200 41355 ~ 43226 (+)
G400526 NA non-coding upstream 4482 14399 ~ 40303 (+)
G400561 NA non-coding downstream 47754 111265 ~ 113040 (+)
G400530 NA non-coding downstream 55801 119312 ~ 122131 (+)
G400533 NA other downstream 92938 156449 ~ 158626 (+)

Expression


Co-expression Network