XLOC_012342 (zdhhc22)


Basic Information

Item Value
gene id XLOC_012342
gene name zdhhc22
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 44767725 ~ 44776224 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024272
AACAACATGGTTCAGTGGTATTCAAAAAAGATGCGTATATAAAATGGCAAAGTCATGCAAAAAATACGTAAACACATTCATATTACCAGTGTTTTATACGTATTACTGTCTGTTATTACTATGTCTAGTGTTTCTGGATGCTGTCTTGTCTACACCAACAGGCGGTGCTAAACCACTGAGACACACCGCGAACAGATGCTCTGGGTATTACGAAATTATAACCAATTTGCcttttatgaatgaatcaaatgtgGTTTATCTGCTGTAGCACCGACGGCGAGGGATGAACTACGGTGTTGATACAGCGGCTCCTCTCCTTTAATCGGCGTCAGGCATGTTGTTCAAGATGGGGAAACTCAAACTACTCAACACGATTGCTCCTGCATACTTCTACGCTGCAACCGTGGTCACATTCGCTCTCCACTTCCTCCTTTTCACGCCCACTATTTTCCAAAGCTCAGATGTGACTATAAATCCCGCAATGCTGGCTCACATCAGTATCTTTCTATTCCTCATGGGGAATGCGCTGGGTAATTACATCATGACTATACGGAACCCATCCGAGAGTGCCAACGAGACCGTTATCCCAGTCTGTTCACCCGACTGCCCGGACAGAATTGATGCGCACTACCTCCTGAATGGACGCCACTTCTGTAAAGTGTGCAAAAAGGTGATTCTAAAACGGGACCACCACTGCTTTTTCACTGGAAACTGTATTGGGAACAGGAACATGCGCTACTTTATTATGTTCAGCATCTATACGTCCAGCTCTTGTCTATATTCATTGGTAATAGGGGTGGCATATCTGACAATAGAGTACTCTATTTCCTTCGAGAACCCATTGACGTTCCTCACTCTTCTGCCACTCTCAACTGGTTACTTCTTCCTTGGTTTGATTTCAGGTCTCCAGTTCTTTCTGGTGATAATGCTGTACATCTGGCTGGGTATTGGATTAGTGAGTGTTGGTTTCTGCTGTCAACAGCTTCTGCTAGTGGCCCGAGGACAGACCTGGTGTGAACTGCAGAAAGGCCAGTTGTCGGAGTGTCGTGGTACCTGGCGAGCAAACCTGACTGACGTTTTTGGTTCCCATTGGGTTCTGGGACTTTTCGTGCCGGTTCCGACTGTCGAGACTGTACCTGGAAACTGGCAGGTCTACCATGATCACAAACACGACTGAAAACTTGCCAAATCACTCTGTTTACCTTAATTTGGACCATATAAGGGCTTCAGTTCATTTGAGCAGCTTAAGCCCATCCAACAGATCTGCCTTTTTAGTGGATTTCTGTCATCACAGAGTAAATTAGGTGAGCGTTATATCACCAAGATGTGATAACATCCATATCTATGTCAATCAGCACTGTGCTGAAACCCAATTTCAGCCCTAGTTTAGGGCAGCAGTGATTAGAAGCAGCAATGATAGAGGAGGTCAGGATTAAAGCATGGATGAGTTTAAACAGTATTTACAAAACATACATATTAGGTAATCAGAACACATCAACAGTGGCCTGCTAAAATGTGGGTGACTGTTAGATTTGTTTAAACTTGATTTGAATTTGATTATATGCTACAAGAACTTGAATTACAATATAAAttggtatttaattaattatatgtgAATTTTAAATACTTTGTGGAAAATTATGCCGGTTTTCATCCACATATTTGATTTTGATGCAAATTATATACACTTAAAAAGTCAAACTTATGACTATATAACTATACTATATGACTATATACATAGTATAACCTTCTACTAttgcttttatttcttttgaaTCTTGTCAAGCCAGCAAGAAAGTAAACCCTTCTTTAAAAGATTGGGTCAGTTATACAAGGAAGGTTTACACAACTATTATTGACTAAAATTTTAAGACGTTTTTTGCGTTTTGgcaattttgatttttttttatacaatagcagcttttaaaagtaaaaacacaaTCTAATAGAGCCTCTTTATAAAGAGGCATAGCCACTTTACTGGACTGGGATGTGTAATACAGCTACAAAATATTACTATTTGAGACAAATGATGTTCTTCAGAACTTTATATTGCTGAAAGAACACAAAGGTTCCACAAATATATCAAGCACAACatagaaacatttaaaatcaatttCAGATCGCATTACTGCTACATAAATTCTTCTTATTGAAGCCTTGTTGAGCATAAACAGTACTGTATTGTATGACAAGAGTTGCAGTTCTATTTAAATATCACTTACTGTGTGTGAACATCAATACATTTGAATGTCTTTTCTATCTAACATTCTCATGTCTGCGTCCTGTTTGCTACCTCAAGTCAAATTCAGTTTAAATGAGCAAAATTAGTTACCGAACCAGAATAAAACATTGGTATAATAGGTCATTTTGAATAGGTATTTCTGAATAGCTCACACACAGACCAATGTCCTTTATGTGTGACATTTTGTAACGGGTAAGATTAATTTAAAGTGTAACAATGCATACTTGGCTAGATGCAATTCTACAGTTAGGTACTAGATTGTTAGTAGATTATgttactatattttattaaatgattatttccTATCAATCAAATGGcagatacagtgcatccggaaagtattcatagcgcttgagtttttc

Function

symbol description
zdhhc22 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane and endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC22 (zinc finger DHHC-type palmitoyltransferase 22).

GO:

id name namespace
GO:0006612 protein targeting to membrane biological_process
GO:0018230 peptidyl-L-cysteine S-palmitoylation biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016409 palmitoyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0019706 protein-cysteine S-palmitoyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-476 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in Golgi membrane and endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC22 (zinc finger DHHC-type palmitoyltransferase 22).

Ensembl:

ensembl_id ENSDARG00000075170

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024272 True 2607 mRNA 0.38 3 44767725 44776224

Neighbor

gene id symbol gene type direction distance location
XLOC_012341 NA coding downstream 78795 44686138 ~ 44688930 (-)
XLOC_012340 slc35f4 coding downstream 182787 44502707 ~ 44584938 (-)
XLOC_012339 NA coding downstream 269100 44482087 ~ 44498625 (-)
XLOC_012338 exoc5 coding downstream 326893 44413770 ~ 44440832 (-)
XLOC_012336 NA coding downstream 358102 44354824 ~ 44409623 (-)
XLOC_012343 ngb coding upstream 185684 44961908 ~ 44968407 (-)
XLOC_012344 NA coding upstream 190732 44966956 ~ 44974388 (-)
XLOC_012345 fam161b coding upstream 204613 44980837 ~ 45009782 (-)
XLOC_012346 entpd5a coding upstream 254183 45030407 ~ 45040813 (-)
XLOC_012347 aldh6a1 coding upstream 295307 45071531 ~ 45104750 (-)
XLOC_012334 NA non-coding downstream 651648 44070341 ~ 44116077 (-)
XLOC_012333 BX511267.1 non-coding downstream 708798 44058811 ~ 44058927 (-)
XLOC_012353 NA non-coding upstream 672845 45449069 ~ 45452814 (-)
XLOC_012354 NA non-coding upstream 708420 45484644 ~ 45485472 (-)
XLOC_012359 AL953848.2 non-coding upstream 1784916 46561140 ~ 46722470 (-)
XLOC_012360 NA non-coding upstream 1862040 46638264 ~ 46638723 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000315_00839331_00842291 ZDHHC22 coding CI01000315 null 838805 ~ 842291 (-)