XLOC_012344


Basic Information

Item Value
gene id XLOC_012344
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 44966956 ~ 44974388 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024552
CTAAAAAGTTGGGACAGAGTCAAATTTAGCACCAATTCACTTCAGCTTTCCTTTTAATTCAGTGGTTAATCATCTGGAAATTGATGATATACACTGTAAAGTCACTGCAGCgtattgaaccgccaactatgtCTGCATATGTTTGACTGCATATGACACTTCCCCTTcggcccttaaaaccgagggtAAAGGGGAAAATTTACCACTAATAATTTGTTGATAGCTACAGAAGAAAAGGGATGCACACAGTTCAGTGTTCTTTTCAAGGCTAAATGTCTCATATCGCACCATTTCGTTTTTCTTCATGTTATAGAAACAGGAAATAACCATAACCAAGATCCAGGCCTGTGACTGGTTTGTGTAACATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024552 True 368 lncRNA 0.39 2 44966956 44974388

Neighbor

gene id symbol gene type direction distance location
XLOC_012342 zdhhc22 coding downstream 190732 44767725 ~ 44776224 (-)
XLOC_012341 NA coding downstream 278026 44686138 ~ 44688930 (-)
XLOC_012340 slc35f4 coding downstream 382018 44502707 ~ 44584938 (-)
XLOC_012339 NA coding downstream 468331 44482087 ~ 44498625 (-)
XLOC_012338 exoc5 coding downstream 526124 44413770 ~ 44440832 (-)
XLOC_012345 fam161b coding upstream 6449 44980837 ~ 45009782 (-)
XLOC_012346 entpd5a coding upstream 56019 45030407 ~ 45040813 (-)
XLOC_012347 aldh6a1 coding upstream 97143 45071531 ~ 45104750 (-)
XLOC_012348 zgc:163014 coding upstream 139627 45114015 ~ 45125537 (-)
XLOC_012349 tmed8 coding upstream 161965 45136353 ~ 45164291 (-)
XLOC_012336 NA non-coding downstream 557333 44354824 ~ 44409623 (-)
XLOC_012334 NA non-coding downstream 850879 44070341 ~ 44116077 (-)
XLOC_012333 BX511267.1 non-coding downstream 908029 44058811 ~ 44058927 (-)
XLOC_012353 NA non-coding upstream 474681 45449069 ~ 45452814 (-)
XLOC_012354 NA non-coding upstream 510256 45484644 ~ 45485472 (-)
XLOC_012359 AL953848.2 non-coding upstream 1586752 46561140 ~ 46722470 (-)
XLOC_012360 NA non-coding upstream 1663876 46638264 ~ 46638723 (-)
XLOC_012361 AL953848.1 non-coding upstream 1695619 46670007 ~ 46670103 (-)

Expression


Co-expression Network