XLOC_012360



Basic Information


Item Value
gene id XLOC_012360
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 46638264 ~ 46638723 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024992
gtgtataaGTTCATAGTGTATagcgtgccatttgggacgcagcttttgtcATTTGTAGGTTGGAGTGGAGCAGAAGTAGAAGAGTCACAGGAACAGTGGAAATATACTTGAAAATCTGGGGCTCAGGAAacaggtagaactgcttgaacagactaaacaatggagtttgtttCCAAAGAAATATATTGAGATtaaagacctgatatctttctctttgacaggttggcatggagcatgtggagaaacaGCGAACCACACATCAGTATTGACAAGTACATCGTAATAAATTAGGTATAGACttacatttttagttgaatcaaattaacttaataaaacatttttaaattatatactttaatttgtaaagactAAGTGATGATTGGGTATTTCCTTCAGATACAGTAAATAGTTAGATAGATGTCTTGTCTGCcgcaggtgtttctttttcaggtaatggaca

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024992 True 460 lncRNA 0.35 1 46638264 46638723

Neighbor


gene id symbol gene type direction distance location
XLOC_012358 CABZ01084273.1 coding downstream 180642 46451371 ~ 46457622 (-)
XLOC_012357 arf6b coding downstream 903805 45731865 ~ 45734459 (-)
XLOC_012356 susd4 coding downstream 1085633 45529453 ~ 45552631 (-)
XLOC_012355 hhipl2 coding downstream 1112328 45501378 ~ 45525936 (-)
XLOC_012354 NA coding downstream 1152792 45484644 ~ 45485472 (-)
XLOC_012361 AL953848.1 coding upstream 31284 46670007 ~ 46670103 (-)
XLOC_012362 NA coding upstream 41705 46680428 ~ 46681496 (-)
XLOC_012363 NA coding upstream 57367 46696090 ~ 46698812 (-)
XLOC_012364 CU137681.5 coding upstream 101483 46740206 ~ 46740303 (-)
XLOC_012365 NA coding upstream 112394 46751117 ~ 46944416 (-)
XLOC_012353 NA non-coding downstream 1185450 45449069 ~ 45452814 (-)
XLOC_012344 NA non-coding downstream 1663876 44966956 ~ 44974388 (-)
XLOC_012341 NA non-coding downstream 1949334 44686138 ~ 44688930 (-)
XLOC_012339 NA non-coding downstream 2139639 44482087 ~ 44498625 (-)

Expression



Co-expression Network