CI01000299_02813216_02818668 (CPO)


Basic Information

Item Value
gene id CI01000299_02813216_02818668
gene name CPO
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2813141 ~ 2819096 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_02813216_02818668.mRNA
CTTTATAAGTCACTGTCAGACTGTACTAGGTCCACACTGTCAGGTTGAAAAGAAGCTTGGATAACAAACAGAACCATGCAGGGCTCAATATTGCCTGTTTTGGTGATCTTGGCTCTAGTGGCCCAGGAAAGATTGGCTGGTGGACTGGAACACAGATCTTATGACTACACAAAGTACCACACCATGGATGAGATTTCAGACTGGATGAATCAGATCGAAACGGAAAACCCAGACGTTGTGTCCAGCATGACGTATGGACAAACTTATGAGAAGAGGAACATTAAATTACTAAAGATCGGCTTCAACAGCACCACACCAAAGAAAGCCGTTTGGATGGACTGTGGGATTCATGCCAGAGAATGGATCGCTCCAGCTTTCTGTCAGCATTTTGTTAAAGAGATCCTGGGCTCCTACAAAACAGACTCGAAGGTGAACACATTGTTTAAAAATCTGGACTTTTACATCACCCCAGTGCTGAACATGGACGGATATATTTATTCCTGGAAGGATAACACAACTAGACTATGGAGGAAGTCCAGATCACCAGGCACTGAAAACTGCACTTGCTTTGGCACTGATCTCAACCGCAACTTTTACGCTAACTGGGGGATGGTCGGGATCTCCAGGAACTGCTGTTCAGAGATCTATAACGGTCCGACTGCTCTGTCTGAGCCAGAGGCCAAAGCCGTCACTGACTTTTTGGGAGCACATCAAAACCAAATACTCTGTTATCTCACCATCCACTCGTACAGTCAGCTGATCCTTGTCCCTTACGGGCACCCCAACATCTCAGCACCCAATTACAATGAACTGATGGAAGTAGGTCTCGCTGCGGCTAAAGCCATCAAAGCAGTTCATGGGAAGAGCTACAAAGTGGGCACTTCCCCTGATGTGCTGTATGCGAATTCCGGCTCTTCACGTGATTTTGCCAGACTCATAGGGATCCCATACTCCTTCACCTTTGAGTTAAGGGACGAAGGGCAGCACGGCTTCATTCTACCCGAGGATCAAATCCAGCCCACATGTCAAGAAGCTTACCAGGGTGCAATGTCCATCATAAACTACGTCCATGATAAGAATTTCAAAAGTGCAGCGATTACAGTCACAGCCACATTGTGCACAACACTGACGGCCCTATGGATCTCAAGCACTAGTGTGTTCTAGAGCACTATTTCTAAATGGATTTTGTCACATTTTTTGTTGCATTATGCAATTTTATCGTTTTAGATTTTCTTTTATGCTTAAATAATAACAACTGTGCAGAAACCACATGGTTTGATATTTCACTGTGGAATGTAATAAAATATTTTTAAGTGTGGCTTGTGTTCAAATACTTTTATAAATTTTAATATAGATATATAGACTTGTAACCAAGGAAGCAGGGAAAATTAATTTAAATAATAAAATAATTAATAAACAGAAACATACAACATTTTTTAGCATTATTATATTAGTGAGAAATTATTTGTGTTTTTTAATATTGATCGCAGAGCTCCATTTGTCCAGCAGATGGCAGTATATACACAGAAATCACTGGTTGAACTCTTGTATAAACTGCTGTCAACATCAACAGCATCAGATAAGATAAAACA

Function

symbol description
cpo Enables metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Is anchored component of plasma membrane. Is expressed in intestinal epithelium. Orthologous to human CPO (carboxypeptidase O).

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_02813216_02818668.mRNA True 1592 mRNA 0.41 9 2813141 2819096

Neighbor

gene id symbol gene type direction distance location
CI01000299_02753238_02760499 PUR9, ATIC coding upstream 52188 2753238 ~ 2760953 (+)
CI01000299_02706136_02711943 STK16 coding upstream 99401 2705873 ~ 2713740 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding upstream 108921 2696632 ~ 2704220 (+)
CI01000299_02612562_02613926 NA coding upstream 198349 2612499 ~ 2614792 (+)
CI01000299_02195854_02198465 NA coding upstream 614216 2195798 ~ 2198925 (+)
CI01000299_03144958_03149338 NA coding downstream 325294 3144390 ~ 3149340 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding downstream 338095 3157191 ~ 3166701 (+)
CI01000299_03170577_03174986 CNPPD1 coding downstream 351481 3170577 ~ 3175003 (+)
CI01000299_03176677_03185710 PRKAG3A coding downstream 357581 3176677 ~ 3186067 (+)
CI01000299_03189537_03200831 FAM134A coding downstream 370223 3189319 ~ 3201406 (+)
G405407 NA non-coding upstream 2469 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 82632 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 91817 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 98000 2659354 ~ 2715141 (+)
G405366 NA non-coding upstream 157728 2655180 ~ 2655413 (+)
G405611 NA non-coding downstream 389830 3208926 ~ 3209411 (+)
G405618 NA non-coding downstream 501428 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 502099 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 515131 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 587489 3406585 ~ 3406810 (+)
G403972 NA other upstream 2206791 604870 ~ 606350 (+)
G403609 NA other upstream 2402353 364139 ~ 410788 (+)
G403578 NA other upstream 2740870 35462 ~ 72271 (+)
G405609 NA other downstream 335501 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 1312162 4131060 ~ 4133941 (+)
G405842 NA other downstream 1476437 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1670722 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1883286 4703071 ~ 4704780 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000063 cpo coding NC_007112.7 CM002885.2 5576151 ~ 5587575 (+)