CI01000299_04472181_04474247


Basic Information

Item Value
gene id CI01000299_04472181_04474247
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4470956 ~ 4474271 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04472181_04474247.mRNA
CTATAAAAAGTGAGAGTATTTAGAATATCACAAAAAGCCTAAATAGATTTACAAGATTATGACGCACATAATAATTCTTAATAAATCGTTGTCTACCCCCGTCGCCAAATTATAGCCAAGAAGCATGCAGTTAAGACAGCTGTCAACTTAATAATACAAAATAAAACAATATACAGAAAGATTTGTTAACAGAACTGGGAGCTTGTTCTGTTCTTGTGTCGGTAGACTACATTTCTAAAATGAGGGACGGGCCACAAATCCGTGAGTGCAATTTGCAAAACCGTGTGAACCGCGTGATTGCGAAAACGTCCCTGTTGAAAAAACCAGCATATGCTGGTTAGGTATGTTTTGAAGCATGGAAGCTGGTTTGAGCTGGTCCTGAGCTGGAGCTAGTTGCTTAGGACCAGCTTAAGACCAGCACTTGACCAGCATAAACCAGCTCAAACCAGCTTTCATGCTTCAAAACATACCTAACCAGCATATGCTGTTTTTTTCAACAGGGTGCACACGGATTATGAATTTGTGGGTACGGATTGAAAAAACCAAAGGTACGGTTTACAAATCTGAGTGCATGGATTGGAAATTTGTGGGTATGGTTTATTAATCCGTGGGCATGATTTGTTAAACTGAGGGAACAATTTAAGAATCTGTGAGTGCAGTTTATAAACTGATTGCAAAACTGTGGCCACGGATTTCTGAGTCTTATTTTTTTTCTCCTCGAGGTGACTTCCCGGGCTCCATATTTCACAGAGTACTGTTAGCCACTTTTTGATTGTTGATGGGAGAAACAAGCAGCGTGTGGTGTTTCAAACGCAATTGGTTCAATTAATTCGAAGCTTTTACAGTGTAAATGCAACCAAAATTTTGAATCAACGTTGAATAAAAACACCTTTTACAATCACACTGCAAATGTGTTCCAGCAGTGAACCACTGAAATTTCGAAACGTTTTGAAACCGTTATGACGTAACGAAGCTTCGTTTACTGAAATCACGTGACTTTGGCAGTTTGAAACATGCCACGAACCACTGTTTCAAAACAAAAGATTCGTAAAGCTTCATGGAGCAGTGTTTCGAAATTACCCATCACTACTTTTTGATACAGTGTGATGATCATTATGTATGTCTATAACATCAACGTCCTATTGATCATATAAATTTTGCATACACCTGATATAGCTGCCTGGTTGAGATGAGTGATTTTCTCTGTAATTGTTGTGATGTCATCATGAGCCAACATAATTTTCTGTTCTGTCTCCTCCTCTTCCTTCTTGTGTTGAAACTAAAGAGCTTCAGACTGATATTAATATTAATATTAAACAGACTCATAGCGAGCGAGCGACACTGCACGAGAGAAACCGAATGTGCGCGCGAGAGAGATCGAGTTGTCCGAGAGCGAGCGAACCTGCGCGAGAGAGACCGAGTGCGCGCGCGAGAGAAACCGAGTGTTATGGGAAGCCAAACAAACCAAAAGCAGGACGAGATAGCGCGGTTTTACAGAGTTCGCGCCGCGCTGACATGCCATCTAAGCGGTTCAATGGACCGAGCCGCGCGACCGACTCGTCAGCGCAGCGCGGACGTGCTTGTTTGCGGACAGCGCGGCGCGAACTAATCTCACCAGCGCGGTGCTGACCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04472181_04474247.mRNA True 1633 mRNA 0.42 2 4470956 4474271

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 201191 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 207463 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 337154 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 344575 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 355729 4105476 ~ 4115227 (+)
CI01000299_04480751_04492829 NA coding downstream 6282 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 22115 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 39087 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 57827 4532098 ~ 4539919 (+)
CI01000299_04554181_04557794 NA coding downstream 79840 4554111 ~ 4557840 (+)
G405932 NA non-coding upstream 15271 4455446 ~ 4455685 (+)
G405931 NA non-coding upstream 17087 4453592 ~ 4453869 (+)
G405876 NA non-coding upstream 21961 4418304 ~ 4448995 (+)
G405912 NA non-coding upstream 55945 4414792 ~ 4415011 (+)
G405910 NA non-coding upstream 67650 4400579 ~ 4403306 (+)
G405938 NA non-coding downstream 1717 4475988 ~ 4550799 (+)
G405865 NA non-coding downstream 175665 4649936 ~ 4665044 (+)
G405881 NA non-coding downstream 184070 4658341 ~ 4663395 (+)
G405966 NA non-coding downstream 196944 4671215 ~ 4671482 (+)
G405842 NA other upstream 150815 4295533 ~ 4320141 (+)
G405609 NA other upstream 1315782 3154597 ~ 3155174 (+)
G403972 NA other upstream 3864606 604870 ~ 606350 (+)
G403609 NA other upstream 4060168 364139 ~ 410788 (+)
CI01000299_04703290_04704365 NA other downstream 228111 4703071 ~ 4704780 (+)
G406096 NA other downstream 450191 4924462 ~ 4927844 (+)
G406244 NA other downstream 896910 5371181 ~ 5373579 (+)
G406161 NA other downstream 1763567 6237838 ~ 6300508 (+)

Expression


Co-expression Network