CI01000299_04513358_04524537


Basic Information

Item Value
gene id CI01000299_04513358_04524537
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4513358 ~ 4526677 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04513358_04524537.mRNA
ATGAAGATGTGATGAAAGCAGTGGGTGATCAAGTTTCTTTTCGTCCAGACAAACCTCTTCCTTCTCCTCTCACCAGCATTATCTGGAAACACAGAACCACTGCTGGAACTGTTAACAAGGCGATTGAATGGGATGAAGGAGAAATTCTAATCCCGAATCCAAGATTCAAAGGCATCACAACTGTTGATGAGAAGACTGGACAAATCACTATAACTAATTTAAAAGTCGAACATAGTGGAGTTTATACCATTGACATCAACAGTAAAGAGCAGGAACAGAGATTCACCTTGACTGTTATGGAGCGGGTCCCCAAACCTATGCTAAAAACAGAGAGGAATGAAGATAACCCTGATGTTGTGTCTTTAATATGCAAGTACAGTGAAATGATCATCTGGAAGAATTCTGCTGGAGAAACACTGATGGGTTCAAAACACCATCTGAAAGGAGAGACTTTAGTAGTCAAAAATGAAGGAAATCCAGAAAACTTCTACACCTGTACACTGAAGAACGCAGTGAGTGAGGAGACCAGTGATCCGGTCTATGAGAGAGATCTGTTTAAAGCAAAATCTAGAAGAAAAATGGATAAAAGTGTACTTTTTCTAACAAAAATGTCACTTCGACGTTTGACGTTCGTCACCATCGTTGTGTTCATCACCACAGAAGCGGTTTCAGGTGAATATGTGATAAAAGCAGTGGGTGATCAAGTTTCTTTTCGTCCAGACAAACCTCTTCCTTCTCCTGTCACCAGCATTATCTGGAAACACATAAACAGTGTTGGGATTGTTGTCAAGGTTATTGAATGGGATGAAGGAGAAATTCTAATCCCAAATCCGAGATTCAAAGACATCACAACTCTTGATGAGAAGACTGGACAAATCAATATTACTGATCTAAAAGTTGAACATAGTGGAGTTTATACCATTGACATCAACAGTAAAGAGCAGGAACAAGAATTCAACTTGACTGTTAAGGCTGGCCACCTCATTGCAGCCTGTCCTGCTTTGAAAAGGAAGTTTAGCAGAAAGGCTAACTCTTCAAAGAGTGTGGCTTTAGTTGATCGTCGTACGTGTTTACCAGAATGTGCATCTTCATCTAATGCTCGACCCGCATTCGAACCGTTCATTTTTGATGGAACAGTGTCATTTGATGAGTCGATGTCTGAAGCCAAACCTGTCCGCATCCTGAGAGATACGGGCTCGGCTCAGTCGTTTATTTTAGGAAGTCTGCTAAACTTTTCTGCTCATTCTAGCTGTAAGTTGGAATTGATCAAAGCACAGCATGCTGATCTCACTTTGGTCTCTTGCTTCACAACCGCTGTGAAACAATCTGCCTTATCGAAGCATTCTGTTGCGTATTATTTCGATGAAGAGGTGTTGATGCATAAATGGTCCCCGCCTAAGGCTGAGGAAGACTGGAGTACAGTTTACCAGGTTGTGGTTCCAAAGCCTTACCGACTGCAGGTATTAAGCGTTGCACATGAACATGAACTTTCAGGCCATGTTGGTATCAGGAAAACATATGATAGTTTGCTAAAACATTTCTTCTGGCCATCTATGAAATCTGATGTAGCCAAGTTCTGTAAGTCATGTCATGCCTGCCAGTTAGCCGGTAAACCTAACCAGGTTATTCCCCCAGCTCCTTTAAAACCAATCCCCGCACTTGGAGAACAGTTTGAGCGTATTTTAATTGACTGTGTTGGCCCTCTGCCAAAGACGAAATCTGGCAACTCCTATCTTTTAACTTTAATGTGTGCAACAACCAGATTTCCTAAAGCAATCCCATTACGTACTCTGAAAGCTCCAGCTATCATTAAAGCTATTGTCAAATTCTGCACTACGTTTGGTCTACCCCGGTATATTCAATCTGATCAGGGTAGTAATTTTATGTCCAAAGTGTTTGCAAAAGTAATGAGGCAATTAAATGTCAAACATCAAGTGTCGAGTGCCTACCACCCACAATCGCAGGGTGCTATTGAGCGTTTTCACCAAACGTTGAAATCTATGCTTCGTACCTTTTGTGTAGAGCGAGAGTGTGATTGGGACGAAGAAATTCCTCTTTTGTTGTTTGCGGTGCGCAACACGACACAAGCATCACTTGGTTTTAGTCCATCTGAGTTAATTTTTGGTCATTCTATTGGGGATCGCGTTCTTGTTTTATTGCCAATACCAGGCTCTCCGTTGAAGGCTAAATTTGTTGGCCCTTATGAAATTCAGGCAAAGTTAGGAGAGACTGATTATGTTGTGAATACTTTTAATCGCAGGAGAAAATCAAGAGCGTGTCATGTTAATATGCTTAAGGCGTATGTAGCTCGTTCTGATGTGTCAAAGGTGGCTGTTGCTGCAACTGTTGTACCTGTGAATGTGTCTCTGTCTGACTATTCACCCGAGAGTGATTTAAAAATGAGAACCGACCTCAGAAATTTGATCAATAAGTATCCTACATTATTTAATGATTTTCCCACAACAACGCATGTCATAGAACATGACATTGGTGTCGGTTCACATGCTCCTATCAAGCAGAATGCCTACCGAGTTAATCCTGTCAGAAGGAATCTCATGAAACAGGAAACCCATTATCTGTTAGAACATGGTTTAGCAGTTCCCAGTAGTAGTCCCTGGTGTTCACTGTGTTTGTTAGTCCCCAAGTCTGATGGTACATCCAGGTTTTGTACCGATTATAGGAAAGTCAATGCCTTAACTAAACCTGACTCGTTTCCATTGCCTCGTGTTGAAGATTGTGTTGACCATGTTGGGAATTCAAAATTTGTCACTAAACATGATCTATTAAAAGGATACTGGCAAGTACCACTTACTGAGAAGGCTTCTGAAATTTCTGCCTTTGCTACTCCCGATGCATTCCTTCAATATAGGGTTATGGCATTCGGACTACGGAACGCTGGTGCAACATTTCAGCGTTTAATGTCAAAAGTGTTCGCTAATGTACCCAACTGTGAAGCTTACCTTGATGATGTTGTCTGTTATTCTTGGGATTCTTGGGATGAGCATGTCAAACTCCTGAACTGTGTTTTTAAACGTTTGAAAGAGGCCAATCTTACATTAAATTTGGCAAAATGTGAATTTGCTTGTGCAACTGTAACCTATCTAGGAAAGGAGGTTGGAAATGGCAAAGTTCGACCTCTTGGCTCCAAAATTCAAGTTATTCTGGATTTTCCTGTGCCTATGACGAAGAGAGAGCTTAGGCGTTTTTTAGGCATGACTGGCTACTATAGAAATTTCTGTAGAAACTTCAGATGTGGTGAATCCTCTTACAGGATGGGGGTGTTACATCCGATGTCTTTAGGCACTGTTGCCATGTATGTTTTGAGTGTTTTTGTACAGGAGAAGCTGATCCTGAAGGACTATATTCTCCAGCACAGACAAACAGTAACGGATTCCCTGCTGCTGTACATGTCTGAACAAGAAAGAACTGTCATTATGAGCGCTTTAAAAGACATTGACTCGGATGAACTGTTTGATGTTCTTGAGCGCAAACGTGTCCCTAACAAGGACAATCTGGTCCCTCTGCTGGCACAAATGGGACACAAATCCATCGTACAGGTCCCAATGTATGTGATCGAGTGCTGGCGTCCCATTATGGTGGATGTTAGGATGCTACCATTAGATGGTTTGCACTGTGCAATTCAAACAACTGCAAAAACAGTGAAAGAGCTGTTACTCTTCCAGATGACATGACAGCACCCCAGACAACAGTTGCATGGTATCTGAAATTGATCTGAACACCCTTCAGCTTTTCCTCCGGTTCTGTGCTGGTTCAGATTTCACAGAGAAGCCTTTTACAATTGAATTCATTAGTGATTTTCTTCACAGACCACAAACACACACATGTGGATGCATTTTAAAACTGCCAGTAGGCTATCACAGTTATCCCGATCTCCGCAGTGAATTCAATAAGATCCTCACAAGCTCAGTGTGGGTTATGGATATTTTTTAAAGGGGGGGTATCACACACACAGTTTCTGCCAATCTCATGTTAATCTTGAGGACATCTAGAGTAACAATGCATCCTTCATATCTCCGAAAAGTCTTTAGTTTTGTCATATTTATAAAAGATAGATACGCTAAGCCTAGTCTTTCCGAAAAAAGCCAAGCTCCTGGAGGCGTGTCTGCCGTCAGTGGCGGAGCTAAAGAGTCATGAGCGTGCGCAGTTTCTGTGTAGAGATCGTCTGCTAGCTGCGACATCATTATAAATAAAAAGGGAACAAAAACGTTTTTTTTGTTTACGCACTTGTGCGCCGATTGCCAACAAAACACAGATATCTGATGCAGCTTTACTCCCCGCCCGCGATCTGCAAATCCAGCGCCGAAATGGGACTTGTTTACAAAGTATTCATCACCGAAATCCCGGGAACAAACAAACAAACTCTATTGCTGCCCCGGGAAAAACAAACTTCATCCTCTGTTCCCTTAACACTGGGTTCTTTGGGAAGCTGAAAAAGGTAATCTCTCCCTCACAACCAAAAACACACTCCTTCGGTGACCGGAGCTGCATGGGGCCTGAATTGGGCCATTGTTAAAAAATCTCTCGTCTTCCGTATCCTGAATGAAACGCGTTGATGGGCGTGCTCTTGTTGTGGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGCGTGTGTGCGCTTATCAGGGAGAAGTGTCTATACAAGGAATTCCGCTCTCTTTTGACGTCATACAGGACACACTCGAAAAAAAACTCAGAATCCTGTACTGAAACCGGAAGTAGTGTATTTGGCACAGAAATACTCCGTCATACAGTGGGTACATAAAGTATTCAGACCCCCTTAAATTTTTCACTCTTTGTTATATTGCAGCCATTTGCTAAAATCATTTAAGTTCTTTTTTTTCCCTCATTAATGTCTGCAAGGAGGAATGGCAGAGGATCCCCAAATCCAGGTGTGAAAAACTTGTTGCATCTTTCCCAAAAAGACTCATGGCTGTATTAGATCAAAAGGGTGCTTCTACTAAATACTGAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTGTGTACATTAATGAGGAAAAAAATGAACTTAAATGATTTTAGCAAATGGCTGCAATATAACAAAGAGTGAAAAATTTAAGGGGGTCTGAATACTTTCCATACCCACTGTATGTCCAACTCCTGTTTTGAAACTTTGGCCATGTTTAGCATGAGAATGCAACTCTTTAACAGTGTAAATAAGTCAGAATGCATGAAATAGCATTACACCCCCCTTTAATCCCACAAAGTTGACAAGCACAATTCTGTGACCAAGAATGTGAAGAAATCAAGAAACGTGACATAGTCCCAAGCAGAAATTTGTACACAAATAAGTAAATTGGCCCAACATTTGGCACAAGGCTACTAGAAGGATAATAGCTCTGTTTTCATGATACAAAATCACTTCAATAGTTGATAATTTTTCAGAGTTGTTTGACACCACATAGAAATGGTTATGTTCAGGAGAACGTGAAGTAGAACTGAATGTATTACAGTTTCCTCCAAAACTAAATATTCATTCATTCTTATAGTGTAGGAATGCACCATGCAGTACAGGATTGGTTTTGTCCAGTCTTTATCTTAATTATACAGCACATGTTGTTATGTAGCTTAGAACTAGGCTATATTACTTGGTTTCTACTTGAATTGGTTCATACAGGAAATTACGCTTATGTGTGCACTTGTGAACATTATAGCAACTGTGCTTTTCTTTTTCTGAGTTTTTATAATATATTTTTGGAGTTTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04513358_04524537.mRNA True 5832 mRNA 0.41 11 4513358 4526677

Neighbor

gene id symbol gene type direction distance location
CI01000299_04496757_04504238 NA coding upstream 8875 4496386 ~ 4504483 (+)
CI01000299_04480751_04492829 NA coding upstream 20242 4480553 ~ 4493116 (+)
CI01000299_04472181_04474247 NA coding upstream 39087 4470956 ~ 4474271 (+)
CI01000299_04269257_04269673 NA coding upstream 243593 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 249865 4258921 ~ 4263493 (+)
CI01000299_04532498_04539703 NA coding downstream 5421 4532098 ~ 4539919 (+)
CI01000299_04554181_04557794 NA coding downstream 27434 4554111 ~ 4557840 (+)
CI01000299_04703290_04704365 NA coding downstream 176394 4703071 ~ 4704780 (+)
CI01000299_04736806_04740333 CLIC6 coding downstream 210129 4736806 ~ 4740975 (+)
CI01000299_04819297_04829755 NA coding downstream 292008 4818685 ~ 4829987 (+)
G405932 NA non-coding upstream 57673 4455446 ~ 4455685 (+)
G405931 NA non-coding upstream 59489 4453592 ~ 4453869 (+)
G405876 NA non-coding upstream 64363 4418304 ~ 4448995 (+)
G405912 NA non-coding upstream 98347 4414792 ~ 4415011 (+)
G405865 NA non-coding downstream 123259 4649936 ~ 4665044 (+)
G405881 NA non-coding downstream 131664 4658341 ~ 4663395 (+)
G405966 NA non-coding downstream 144538 4671215 ~ 4671482 (+)
G405967 NA non-coding downstream 144848 4671525 ~ 4671895 (+)
G406023 NA non-coding downstream 164218 4690895 ~ 4766223 (+)
G405842 NA other upstream 193217 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 379417 4131060 ~ 4133941 (+)
G405609 NA other upstream 1358184 3154597 ~ 3155174 (+)
G403972 NA other upstream 3907008 604870 ~ 606350 (+)
G406096 NA other downstream 397785 4924462 ~ 4927844 (+)
G406244 NA other downstream 844504 5371181 ~ 5373579 (+)
G406161 NA other downstream 1711161 6237838 ~ 6300508 (+)

Expression


Co-expression Network