CI01000299_04554181_04557794


Basic Information

Item Value
gene id CI01000299_04554181_04557794
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4554111 ~ 4557840 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04554181_04557794.mRNA
GTATAAAGACATTCTGAGAAAAATATACTGTCAAAGAAAAGTGTATGAACGTGTAATTTGTCTAACAAATATGTCACTTCGATGCTTGACGCTGGTTGCCATCGTTGTGTTCATCACCACAGAAGCTGTTTCAGATGAAGATGTGAAGAAAGCAGTGGGTGATCAAGTTTCTTTTCGTCCAGACAGATCTCTTCGTTCTCCTGTCACCAGCATCATCTGGAAACACAGAACCACTGGAGGAATTGTTGTGAAGGCGATTGAATGGGATGAAGGAGAAATTCTAATCCCGAATCCAAGATTCAAAAACATCACAACTGTTGATGAGAAGACTGGACAAATCACTATAACTAATTTAAATTACAGCCATAGTGGAGTTTATACCATTGACATCAACAGTAAAGAGCAGGAACAAAGATTCAACTTGACTGTTATGGAGCGGGTCCCCAAACCTGTGATAAAAACAGAGTGGAGTAAAGTTAACCCTGATGTTGTGTATTTAATATGCGAGTACAATGAAACAATTATCTGGAAGAATTCTGCTGGAGAAAAACTGAATGGTTCAGAGCTCCATCCGAAAGGAAAGACTTTAGTAGTCAAAAACGGAAATCCAGAAAACTTCTACACCTGTACACTAGATAACGGCGCAAGTGAAGAAACCAGTGATCCGGTCTATGAGAGAGATCTGTTTGAGGATTCAAACAGGGGATTTGTCATTTGTATTTCCATCGTTTTGATCTGCAAGGTTCTTTTCAGCTTTTTCCTGTTTATACCAACTTTATATGGTTATTGTGCTGATTTCTGTGAGAGACACAAGACCTCCAAAACGCTGTTGGAAATTCATTCTGAGGTTCTGAATATATGAATCTACTGTAACATATCTGCAAATAGTGACAAGATGAATCTATCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04554181_04557794.mRNA True 908 mRNA 0.38 6 4554111 4557840

Neighbor

gene id symbol gene type direction distance location
CI01000299_04532498_04539703 NA coding upstream 14192 4532098 ~ 4539919 (+)
CI01000299_04513358_04524537 NA coding upstream 27434 4513358 ~ 4526677 (+)
CI01000299_04496757_04504238 NA coding upstream 49628 4496386 ~ 4504483 (+)
CI01000299_04480751_04492829 NA coding upstream 60995 4480553 ~ 4493116 (+)
CI01000299_04472181_04474247 NA coding upstream 79840 4470956 ~ 4474271 (+)
CI01000299_04703290_04704365 NA coding downstream 145231 4703071 ~ 4704780 (+)
CI01000299_04736806_04740333 CLIC6 coding downstream 178966 4736806 ~ 4740975 (+)
CI01000299_04819297_04829755 NA coding downstream 260845 4818685 ~ 4829987 (+)
CI01000299_04864582_04885052 RUNX1 coding downstream 306352 4864192 ~ 4885385 (+)
CI01000299_04892566_04900169 NA coding downstream 332551 4890391 ~ 4900536 (+)
G405938 NA non-coding upstream 3312 4475988 ~ 4550799 (+)
G405932 NA non-coding upstream 98426 4455446 ~ 4455685 (+)
G405931 NA non-coding upstream 100242 4453592 ~ 4453869 (+)
G405876 NA non-coding upstream 105116 4418304 ~ 4448995 (+)
G405865 NA non-coding downstream 92096 4649936 ~ 4665044 (+)
G405881 NA non-coding downstream 100501 4658341 ~ 4663395 (+)
G405966 NA non-coding downstream 113375 4671215 ~ 4671482 (+)
G405967 NA non-coding downstream 113685 4671525 ~ 4671895 (+)
G406023 NA non-coding downstream 133055 4690895 ~ 4766223 (+)
G405842 NA other upstream 233970 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 420170 4131060 ~ 4133941 (+)
G405609 NA other upstream 1398937 3154597 ~ 3155174 (+)
G403972 NA other upstream 3947761 604870 ~ 606350 (+)
G406096 NA other downstream 366622 4924462 ~ 4927844 (+)
G406244 NA other downstream 813341 5371181 ~ 5373579 (+)
G406161 NA other downstream 1679998 6237838 ~ 6300508 (+)

Expression


Co-expression Network