CI01000299_05619817_05725510



Basic Information


Item Value
gene id CI01000299_05619817_05725510
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5619704 ~ 5727439 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000299_05619817_05725510.mRNA
TTATATAACATGATGTCTCACATCTTACTGCTCAAATCATGGACTGCTGTTTGCATGCTTTCTGAGGGACTTTCCCAGATAACACATCCCATCATCCACTGTTCTGTTTTCACATGACCTGGATTGGGCCGTATGTATATGTGTTCTGCCCCTCCAGAGAACATGTGGACGCCGCGGACGCCGTCTGCATCACGCGTACGTCATTCTGGTGCAGCAGTCGTCAGGATCACTCAGGTGTCTTCAGGCTAGACTTTGCTTTAAAGGGACAAATATGTGCTCTGTGTCCATCACAGGTGGTGCGCACCTGTCCTGCTTCAAGACCACATTCCTTCCCTCCCGCAGCATCTGATGACGTTAGTCCAGCACGGCCACCCCTCGGAAAACTACCGGATGCTTTCCTGGATCGCTGGGATTTCTGTCTCCAGGCAACATGGACATACACAATCCTTACATTTCTGACATGCACACAACTACTCAAAATAAAGCAAGAAGCCAGCCGTGGCCATGCGCTACAGAGGCTGGCCGCACCATCACTAATGGCTTTTAAATGTGCTCCTTCTGGGCTCGCGGAGAGAAATACACGAGAGCGGCCCCTGATTTATGGCTATGCTTACCTTTCACCTCGACTGCAGCGCTGCTCCTCATCCTCTCCTGCGCTCGCGGCCCTGCGATGTGGCGAGATCCGCGCTACTGTGCCAGTGGAGATAAAGTACGTTACGCTTCTGATTTATGAAGACAAGCAGATCATATCTAATACATGCGTGTGTTTAGATCGCTGCGATGGGCTCCACTGTTGCGATTCTGCACGTCTTGTGTTGCGTCTAGACACGCGTGATGGAGAACACGTCACTTGTGAGCACGTCTCTCCTGTCAAGTGTCCAGAATGGGCTTTGAGGGATTTGGTGAAGGGCCCGTTTGTGCTCAAACGCTCAAGGGCTTTCAATCAACGACGTGCGGAAGAGCACGTCAGCGGCCTGATAAGCCATCTTGTGCCGACAGGAGAGCTTGAGCAGCAGGTGGACCGGTCGGGTTTCTTTTTCAGCAAGATAAGATCAAATCTTACCAAAGGTGCTGTAAATAATTGTATTCTACCAAGCTTGGATGGATTTACCACAAGTTACAGTAATTTTCACTTTGCCTCCACTAGGGGGCTCATAGTTCTTCCTCGCAGGCGCAAGCTGAGACACGCCAACAGCTGTTCAGTGTCCAGCAGATGCACAGCTGTACTGTTCTTGGAAGAAAAGGCTGCACGAGGGATGGGGACCACGCTTCTCTCAGCGGTGGGCTGCTCTCATCAGAACCAACCGCAGTACTGCAAAAAACGCACAAGCACACCTGACGTTGTTTGCCAGAACCCTAGGGCGCCGTTTGCTAAGAAGAATCAATGGAGATTACGGACATGGATCTTGAGGTCCCAGGCGCCCCCTTCGGACCGGTGGCTTTTATCACCTGCCAGAACTGGCTGGAAGGCCACAGGGCTTTGGGGACTTATCCTGTACAACCCCTCTGCCGTGTGCCAGTCCAAGGCTGTGAGGCTGGTGAAGGATGAATATGGAAGATTATGTCCTACTGCTTTTGGCAAAGAACTGCATCACAGTCAGGAACACATCTTATGCAAGACCACCTTTGCCTGTACCAGGCCAATGATCTCTTTTGATAAGTCAGACCAGGAAAATGTTTCTCATACTCTCTCTGAAAAGCTTTTTGTGGTTCAGAGATATCAAGGACAAAGGGTGACCTTCATCACATGGATCACATGCGATTGTCAGGGCATTATGAATAGTGTGGTAAAGAGCAGACATTGGGCCTGTCATCGGCTCCGATACAGTTGGAGAGATGCTCAAATTCCCATTTTCACCAAAATGATGCTGGTGCCAGAGCATCCCTCTCTCAGAACCGGTCCACATTCACACATAGACATGAAAGTCAAATGTTACGACATAAATTACTCACAAACATTGCCAATTTTCCGACCCAAGCCCTTTTCTTTGGTTGAAACATTGCAAATGGAGCCAAATCGGGAATTGCCTCCAGGACCAGCGTTCTGCCAGTGGAAAAGAGTCCTTGTCGCTCATGTCACCATCCAGCTACTTCGGATGATGTTTTGTATTATGGATAATGAGGCAGTACTGTTACTGTACGGATATTTCCACTGTGAAACTAGCATGCGACCACATGACAAACGACATGCATTTTACTTTTTCCCTCCTGAGACGTTTCTGGTGAAAGATCCCAGCCGATCACATGGATGTTGTTGTTCCTCCTCTGTTTCCTACATCACCTCCCTCGTCCTCCTGACGATCCCGGAGAGAGATGGCATGGCTTTACCAGGTTATCCCATTCCATCAGAAACGACTGCAGTGAATGAAGAGCTGAAATCTGCTGATTCCAGTTTTAAACTTCTAGGAAACTCACACCAGGGGTCAGAAAGATGTGCTTTCACCTTGCAGGTGACAACGATTGAGGCCTGTGTTTTGTTAAGTCCTGCCAAAACTGTGGACTGGTGGTCTGGTCTTAATTACATCGTTTTTTTTAAGAAGCCCTACATTTTAAGAGGCTTCCTGGCCTCTCCACGCTCTGTTACACCTCATAAACTGCCCCGTGATTCAGCACTCATGAGTTACCCGTCGTGGAGCCACAGCTCTGGCCTGGACAATCGAGATGTGGAGGAGAACCAGCAGTGGATTCGGCCTGCATTAACTGGAAAAGTCGTGTTTTTGTCCTGTCTTCTGTTGGAGAGTCCTGCACCCTGCACAAGTCTCAGTGATCTTCTGGCTCGGAGAGGCCTTGTGGACGGTGAGACTTCCGATTTCCATGAGCAACGCAGGACCCTCATGCGGCTCAACATCCGCCCCAGGAATGCAGATTGCAGGTGCTTTATTGTTGTGTTTCTTGAGCTGGTGAGCGAGGCGTCCCATTTCAAAGATAACACCAAAACACAATTAACCCCAGCGACACTCGAGACGCGTTTCCTGGTGCTCGCTTACCACGTTCTGACAGCGGGTATCAAAACACTGGAAGGGGTGCCAGACCCCCGTTTGACGTCAAAAGGGTTTTCCCCTGAGGCTGATGGGACTTTATTCCCCGCTCACCGCTCGCGTCAGAGGTGGGCTTCGACACAAGATCCTGTCCCTGCGTTAACTTCGCTTGACTGCGTCGTTTCTTACGGTAATCCTTCGCTCGGAGAGTCGTGCACATGTGTCAATCGAGTGAAGGCTTTTAACAGAGGGAAGCCAGCAGAGAGCAACACCTGTTCCAGTCGGAGCAGCGGCTCTGTAATCACTGCGGTTTCCAAACCTCATCCAGCTGTTCCTCCAGTGATAGTGTATGCATCAGGCAGACATTCGTATCTTGACATTGACGTTGTCCATGTTCACCCGTCCCTCTCCTCCATTCCCGCTCTAACGTCATTTCTGGGAAAGCGTACGTCAGGGCGAGATATTGACAAAGGGATGGCCTCTATTTTTGTCGCATTCCACAATCGGATGACTGAAGCCTTCAGTAACTCCAGAACCAAATGCAGCTCCTTACGAAACCCCGCCCACTCCCTTCATCCCCCGCCACTAACGAGCCCAGCAGACGCCGTACGAGCCGAATGCACAAGCCCTGAGTCCTGTACTGCAGCGGGAGAGTTGAGGAACAGGGATGTGAACGCGGGTTATTCTGGAGCTGGAGCCACAGGCTTTTCCTTCCTGTGGTTTAACGGCCCACTGACCGGTGCCTGGCTTTCATCTGCGCGGACGGAGCTGAAGGAGATTGTTTACAGCTACTGCATTACAGTCCTGCCAGTTAACCCACGGGATAACCATGAACACATCGTCTGCTTTTTATTTCCTGAAGGGCATCAAAACAAAGAGCTTTTGCCACGCGCTGACGTTTTCTGCAGTTACTCACAGTTACCGGCGTTTGTCAAAGAGTACTTCCACCTTTTCCAGGGCCGCAACATGCAGGCGTTTTTCAGCCCCGTCGGTGTCGACCCTCTCGGCCAGGTTCACGGGAGCGTCCGGCGACTCTCGCTGCTGTGGCCCAGTTTAATCCTCAAAGAAGCCCTGTCTGGAAAAGCCTCCTCCAGAAGCCCATGTGCTCCCAAAACTAGCTCCTTCCAATTTAACCAAAGGAGTAATGGCCGTCAAGTGTCTTATTTTGGAAACTCTCGTGAGCTCATGCTTGCACTTGCGTGGACCTTAAATTCAATACCCTCTATGACAGCAGAACAAAAGAGTCTCTTTTACGAGACGTCTCTGAGACGCAGTGTGGCGGCAGTCGCGTGCTGCTTCAGCATCCTGCTCCTCGTTCACTGGAGGCACATTTGGCTCACACATGTTCTCCCTGAGGGCTCCACTGGACCTGGACATTATCTGCATGGTATTTTGAAGAAAAGATTCATTAGATCTGTGAAAGAGAACATGCTGTCTGAGGAAGAGGACAGTCCGTCCAACCTGCTTCCCCAACAGCCGCCACTGTTGATAAGACACGCCCATTGGCTGCTCCTGATCGGCTGTAAAGCATGCTTTAGCTGGGCTTGTGTGAGGCTCAGAGGCTGTAGCCGTAAAGTTTCAGTGCCGCAGGCGGAGATTTTCTCAATCCCGCTAGATTTCCTCTCGTTTCCATTGACTGACCTCGCCGATGTCAGAGATCCCGCGCTTGACCCGTGTAATCCTGACCTCTACACCATCACTTAAACCCTTCCAGACCTCCTGCACTGGGCTGTTTCTGTTGCTTTATTAGATATGTGACAATACCAGCTAACAGGAAATGCTTTCATAAGGTTCTCTCAAAGTTGTGAACAAACCTTCTTCCAGTAATGTTAATAGAACATTTGTTCAAAGTTATCTGGTCTTTTTTAATGTTCGCAAAAACATTAGGACAAAAACATCATTTATATATCATTTATGAAGCCACTCCGAGTACCCTAGCAACCGCATAACAAGATCCTAGCAGCCACCCAGAGTACCATAGCAACAGCATAGCAACCACACAGAGTACCGCATAGCAACACCCTAGCAACCACCAAGAATACCCTAGAGACCGCATAGCAACACCCTAGCAACCACCCAGAGTACCATAGCAACAGCACAGCAACCACAAAGAGTACCACATAGTAACACCCTAGCAATCATCAAGAATACCCTAGAAACCACATAGCAACACCCTAGCAACCACCCAGAGTACCATAGCAACACCGTAGCAATCAACCCAACTACCTGCATAGCAACACCCGAGCAACCACCATAAGTACCGCATAGCAACACCCGAGCAACCACACAGAGTACCATAGCAACACCCTAGAAACCACACAGATTACTGCATAGCAACACCCTAGCACCCAGAATACCCTAGAAATTGCATAGCAACACCCTTGCAACCACCCAGATTACCATAGCAACAGCATAGCAACACCCTAGCAATCAACCCGAGTACCTGCATAGCAACACCCTAGAAACCACACAGAATACCTGCATAACAACACCCTAGAAACCAACCAGAATACCCTAGAAACCACATAGCAACACCCTAGCAACCACCCAGAGTACCATAGCAACAGCATAGCAACACCCTAGCAATCAACCTGAGTACGCGTTTAGCAACACCCTAGAAATCGCGGAGTACCCGCATAGCAACACCCTAGCAACGTAAAGCCTCAAACGTACCCTCAAACGTAAAGCCTTCAAACTTTAAACTTCTTAAACACTTTCTTTTTCTATCTCTAAACAATTTCACACTTCAGGCTTTTTCAATTACTTCAAACTGTCAGGCTAGGCTTTCTCAAGCCAACATCGAAATTTCATAGAACCTTTTTTCTGAAACATTTTAGTTGGACGCTAGTCTAACATTTTTTAAACGTTACTACTTGTTTCAGAACATTCAAAAGTAACATTCCCATAATGTTCGCAAAATGGAATGTTCCCTTAACATTTACATAATCAAGACAACACATTTTGAAAACATTTTTTTTAAAAAACAGGTCGTTAAGAGAACATTCAGAAATAGCGTCTAATGAGAATGTTAGATAAACATTCTTAGAACATATAAGCTATTTGTTAGCTGGGATGCTGGTATAAGATGGTGAGATTGTGGTTTTCCATCATGATAGTGTCCCAGAAAACATAGAATTACCAAAGTTTTTTAATGTTATATTTTTATACCATTAAAGTGCGAGAATAGACGGCGGTCGTGATATTTCCCACCTACCCTCCACCCTTACACGTACGCCATCATTAACCGAAAAAACAACCCGCTCTGCCATTTACTAGTCCTCTGGTGAAAGCAGGCCAAACTGTCTCTTTATAGGCTCAGTGTGTGTGTAAGACAGAGAAAGGCAGTAAAGTCAGAGTTTCAGCGTAACTTCTCCATCCGCGGTAGTATAACTTTAACACGCAGCAGCTGTGCGTCGCGCTCAACCTCCCTATAGACGGATAAATCCACTCACCTTTGATCTGACCTGCTCTTGCTTCACCTCCACGAGTCTCTCGCCTTCATTTAATAACTCTTAATTAGTGGTGTTTACTAAGCCAAGCATCGCTATTACTATTGCTCATATTAGGGTTTGAGATTTAAATAACCTAACCTTATTAAATTTCAACATGTAGGTTTTCCTGCACTCGGGATGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000299_05619817_05725510.mRNA True 6611 mRNA 0.48 36 5619704 5727439

Neighbor


gene id symbol gene type direction distance location
CI01000299_05392812_05418070 GART coding upstream 201352 5392692 ~ 5418352 (+)
CI01000299_05331367_05364944 NA coding upstream 254727 5331201 ~ 5364977 (+)
CI01000299_05254419_05314859 NA coding upstream 303461 5254419 ~ 5316243 (+)
CI01000299_05128395_05192154 NA coding upstream 426710 5128348 ~ 5192994 (+)
CI01000299_04906697_04907091 NA coding upstream 709631 4906697 ~ 4910073 (+)
CI01000299_05732790_05737401 N6AMT1 coding downstream 5351 5732790 ~ 5737802 (+)
CI01000299_05778912_05790662 NA coding downstream 51124 5778563 ~ 5790755 (+)
CI01000299_05799020_05801977 NA coding downstream 71503 5798942 ~ 5802114 (+)
CI01000299_05816534_05817445 NA coding downstream 89095 5816534 ~ 5817456 (+)
CI01000299_05836707_05843149 NA coding downstream 108862 5836301 ~ 5843594 (+)
G406315 NA non-coding upstream 64836 5552642 ~ 5554868 (+)
G405987 NA non-coding upstream 190059 5424589 ~ 5429645 (+)
G405992 NA non-coding upstream 240689 5376267 ~ 5379015 (+)
G406134 NA non-coding upstream 362492 5256739 ~ 5257212 (+)
G406101 NA non-coding upstream 663348 4956150 ~ 4956356 (+)
G406189 NA non-coding downstream 29338 5756777 ~ 5827969 (+)
G406164 NA non-coding downstream 31785 5759224 ~ 5762316 (+)
G406210 NA non-coding downstream 102645 5830084 ~ 5831741 (+)
G406417 NA non-coding downstream 172218 5899657 ~ 5899988 (+)
G406168 NA non-coding downstream 200743 5928182 ~ 5929929 (+)
G406244 NA other upstream 246125 5371181 ~ 5373579 (+)
G406096 NA other upstream 691860 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 915079 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1113787 4480553 ~ 4493116 (+)
G405842 NA other upstream 1299563 4295533 ~ 4320141 (+)
G406161 NA other downstream 510399 6237838 ~ 6300508 (+)

Expression



Co-expression Network