CI01000299_05778912_05790662



Basic Information


Item Value
gene id CI01000299_05778912_05790662
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5778563 ~ 5790755 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000299_05778912_05790662.mRNA
ATATAAAAAGTTGATATTGTTTTCAAGGTCACAAATGTGTGCACATGCTTTTCTTTCTTTGAACTTGCACACTTGCTTTGTGACATCCAGATATTTGTAAGTGTGACTCAAGTGTCCACTATGTGTTTGTGTGTGAACTGACTGTATGTCTTTCTGGGGACAGTTAAGACAAGTTGGGAAAATGAGTGGTTATTGTGGCTGATAAAATAGAGCAGAGATTAAGAGACGTAGAAAAGGCAGAGGGAGGGGACGTGGCGCAGAAAAAGGGGCCACCCCTAAACGCTGGAAATTCACAGCCTACACTGCTCGCCATTGATGTGGTTAGAAAAAAAACCTTCCAGTACGCAGGATGAAGATTCTTCCCAAACGTTATAACAGCTCAACATGGACTGCGAGTCAAAGTCAAGTGTTATCTCAAACAGTGTTAACCACACATGCTCTCAGATCTCTGAGTCAATCCACGAAAGTTGACCAAAGCCTCAAAAGAAGAGTATCAATGTCTGACAAACTGCTGATGAATGACACCTCAAGCTTCAACCGCACGACTGCCTACCCCAGCGAAGGCATGCGCATTCTGCAGATGATCGTGACCGTGATTATCTTCATCGTGGGTGTTTCTCTAAACGGTCTGGTGATCTGGGCATTGGGGGTTCGAGTTTGGTTCCGCAATAGGGGATCAACCAGAGAGACGCAGAGCGCCGACAGCTTCCGGATCTATGTAGTAAACCTGGCGCTTGCAGACTTGGTGCTGCTGTTACGTACGCCACTAATGGTGCCGTACTTGATGAACTACTTCACTTGGACATTGGGGGAAACCGCATGTAAGCTGATCATTTACCTGCGCTGCCTCGGATTGTACGTGAACGCATTCTTTCTGTGCACCATTGCGGTGGAGCGCAGCTTGTGTCTCCTTAGACCAGTTTGGGCACGAATGAAGCGCCCTCGTTGGGCCGTGCCATTGGCCTGCGTTGCAATCTGGGTGTTAGCGGCATTCTTCGCTTCACCCTACATTGGCACAGCCAAAATCATTTCCTGGGAGAACCGTACGGCCTGCATAGAAAGTGATTTGGGAGTAGGACAAGCCTTAATAGCTGTGGAAACCTTGGCAGGATTCTTGCTACCGCTGGTGATCTTCATGTCGTGCAATATTGCAGTGATTTTTTGCACAAAGAAGGCCAAAAGCACAATGTCTTCCCCTACCTCGTCATCTGGACCAGGTTACACAACCCACCGGCTGACTCGTCTCTACCGGGTCCTCTTTCTCACCATGCTCCTCTTCCTAACCTGCTGGGTGCCTTACTTCACCTGCCGCTTCTTAAGGGCTCTCTCACAGGATCACCCGAAGCTCAAAGAAGTGATTGCAGGCACTTACGTGGCACTATTTCTAGTTTACATAAAGAGCGTGCTCAACCCCATGCTGTACGTGATCGTAACTCCTGTAAAATGTGCTTGTTTTAATTTTTGCTATGATACTGGAGTATGAAGTGGAAATGAGTCAAACTGAGGCGTGGCATCGATCCCCAATACTACATGATACAGATGATCACTTCAAAAGCGCTGATGTCTAGACTTGCAT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000299_05778912_05790662.mRNA True 1576 mRNA 0.47 3 5778563 5790755

Neighbor


gene id symbol gene type direction distance location
CI01000299_05732790_05737401 N6AMT1 coding upstream 40761 5732790 ~ 5737802 (+)
CI01000299_05619817_05725510 NA coding upstream 51124 5619704 ~ 5727439 (+)
CI01000299_05392812_05418070 GART coding upstream 360211 5392692 ~ 5418352 (+)
CI01000299_05331367_05364944 NA coding upstream 413586 5331201 ~ 5364977 (+)
CI01000299_05254419_05314859 NA coding upstream 462320 5254419 ~ 5316243 (+)
CI01000299_05799020_05801977 NA coding downstream 8187 5798942 ~ 5802114 (+)
CI01000299_05816534_05817445 NA coding downstream 25779 5816534 ~ 5817456 (+)
CI01000299_05836707_05843149 NA coding downstream 45546 5836301 ~ 5843594 (+)
CI01000299_05844429_05845510 NA coding downstream 53406 5844161 ~ 5845665 (+)
CI01000299_05864998_05873333 NA coding downstream 72879 5863634 ~ 5873515 (+)
G406164 NA non-coding upstream 16247 5759224 ~ 5762316 (+)
G406203 NA non-coding upstream 33137 5312168 ~ 5745426 (+)
G406354 NA non-coding upstream 138697 5634748 ~ 5639866 (+)
G406315 NA non-coding upstream 223695 5552642 ~ 5554868 (+)
G405987 NA non-coding upstream 348918 5424589 ~ 5429645 (+)
G406210 NA non-coding downstream 39329 5830084 ~ 5831741 (+)
G406417 NA non-coding downstream 108902 5899657 ~ 5899988 (+)
G406168 NA non-coding downstream 137427 5928182 ~ 5929929 (+)
G406427 NA non-coding downstream 157943 5948698 ~ 5948928 (+)
G406213 NA non-coding downstream 222653 6013408 ~ 6015647 (+)
G406244 NA other upstream 404984 5371181 ~ 5373579 (+)
G406096 NA other upstream 850719 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1073938 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1272646 4480553 ~ 4493116 (+)
G405842 NA other upstream 1458422 4295533 ~ 4320141 (+)
G406161 NA other downstream 447083 6237838 ~ 6300508 (+)

Expression



Co-expression Network