CI01000299_05844429_05845510


Basic Information

Item Value
gene id CI01000299_05844429_05845510
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5844161 ~ 5845665 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05844429_05845510.mRNA
GAATAAAGACCAGGATGCGAAACTGAGACACGACATCATCTCCTTCGCTCTTATCCGCGCGATGCGCGTGCATGTACACAACCGCGCGAACCTCAAGGAAGCTAACAGACTGAAGGAGTCTTTCGATTGGCTGAGGAGTTTCCCCCCCAAGTTATCTACAAATATTGTGTTTAAGATAATGAAACAATATTAAACACGCGACACCGTCGTGTTTCAGTAAATCAACCTGAATTGCATTCGACGGATTTACCTCAGACCGTTGAAGAAAATGATTCGCGCGGTTTTGTGCTGTTTATGTTGTTTTCTTCCGGATGGAGTGTTTGGCGTTGAGACGGATGAGATAGAAGTGCCAGTGATGGCGGGAGATTCCTTCACTCTCCGCACCGGTCTGACTGAGATTCAGAGCGACGGTGAGATCGAGTGGCGGTTTGGATCGAGCAGAACTCGTATAACCCGAATAACGGCGGGAAACGTTACTAGATATGAAGACGAGAAATTTAGAGGCAGATTGAAGCTCGAAAGACAAACTGGAGATCTCACCATCACAAACGTCAGTAGCGAACACAATGGAGTTTATCAGCTGAGCATCATTATCAAGAATAAGAAAACAATCAATCGATTCGCTGTTACCGTTTATGCTACTTTGCCCACTCCTGTGATCTTCAGTGACCCTTCACAATGTTCTGAAAGATCAAGGATCGTCCTGTGTTCAGTGTTGAATGTGAGTCACGTGACTCTCTCCTGGTACAAAGAAAACGGTTTATTGATCAACATCAGCGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAGCATCAGGATAAAAACACCTACAGATGTGTGATCAACAATCCCATCAGCAACCAGACCAAACATCTGGACATCAGTGGACTCTGTCAGACACCTTCAGACTGCGACCTTTGTTTTGACACCACTGAAGCTGTGATCCGATTGGTCGTCAGTGCTCTGATGGGCGTGGCTGCAGTAGCTGCTGCTGTTCTTCTGATTAATGACATCAGAAGAGCTGGAAGAACATATAAAATCAAACAGCGATACAGCGATGTACCTGATACTGTAAAGCAATAATAAACAGTACCTTTTTAGTTTTTTTCCCTCTTTGTTTTTAACCAAATTATTTTTCACTCTTTTCTTCTCAAAAATGGGAAGAAACTTGTTATATTCTGATGCCTTTTAGGTTAGAGTTAAGTGACATATTTGGAACTAATCAGCTACTCATGATA

Function

NR:

description
Si:ch211-222k6.3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05844429_05845510.mRNA True 1251 mRNA 0.44 4 5844161 5845665

Neighbor

gene id symbol gene type direction distance location
CI01000299_05836707_05843149 NA coding upstream 567 5836301 ~ 5843594 (+)
CI01000299_05816534_05817445 NA coding upstream 26705 5816534 ~ 5817456 (+)
CI01000299_05799020_05801977 NA coding upstream 42047 5798942 ~ 5802114 (+)
CI01000299_05778912_05790662 NA coding upstream 53406 5778563 ~ 5790755 (+)
CI01000299_05732790_05737401 N6AMT1 coding upstream 106359 5732790 ~ 5737802 (+)
CI01000299_05864998_05873333 NA coding downstream 17969 5863634 ~ 5873515 (+)
CI01000299_05903841_05913302 NA coding downstream 55799 5901464 ~ 5915312 (+)
CI01000299_05925030_05926229 NA coding downstream 79005 5924670 ~ 5926297 (+)
CI01000299_05935373_05943285 ERCC5 coding downstream 89238 5934903 ~ 5943413 (+)
CI01000299_05955084_05970603 NA coding downstream 108551 5954216 ~ 5971417 (+)
G406210 NA non-coding upstream 12420 5830084 ~ 5831741 (+)
G406189 NA non-coding upstream 16192 5756777 ~ 5827969 (+)
G406164 NA non-coding upstream 81845 5759224 ~ 5762316 (+)
G406354 NA non-coding upstream 204295 5634748 ~ 5639866 (+)
G406315 NA non-coding upstream 289293 5552642 ~ 5554868 (+)
G406417 NA non-coding downstream 53992 5899657 ~ 5899988 (+)
G406168 NA non-coding downstream 82517 5928182 ~ 5929929 (+)
G406427 NA non-coding downstream 103033 5948698 ~ 5948928 (+)
G406213 NA non-coding downstream 167743 6013408 ~ 6015647 (+)
G406220 NA non-coding downstream 179386 6025051 ~ 6025357 (+)
G406244 NA other upstream 470582 5371181 ~ 5373579 (+)
G406096 NA other upstream 916317 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1139536 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1338244 4480553 ~ 4493116 (+)
G405842 NA other upstream 1524020 4295533 ~ 4320141 (+)
G406161 NA other downstream 392173 6237838 ~ 6300508 (+)

Expression


Co-expression Network