CI01000299_06295715_06298755 (F7)


Basic Information

Item Value
gene id CI01000299_06295715_06298755
gene name F7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6295613 ~ 6298775 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06295715_06298755.mRNA
AAACTCAAGCGCTGATCAACATGCGTCTCCTGTCAGTGTTTTATGTCCTCTTGAGTCTTTACTGTTGTCATTCGGCTACAGTGTTCATGGGAAGGGACGGGGCTCATGAGGTACTGATCCGGACCAAGCGGGCAAACTCGGGCTGGTTCGAGGAGATGAAGATGGGTAATCTGGAGAGGGAGTGTCTGGAGGAGAAGTGTTCATATGAGGAGGCGCGGGAGGTGTTCGAACACACGGAGGCCACCAATGAGTTCTGGAAGATCTACAATGTTAAAGATCATTGTGAATCAAATCCATGTGAGAATAACGGGCTCTGCATGAGCCAGAACGCAGAATCCTACACGTGTCTGTGCACGGCGGGCTTCAGCGGACGCAACTGTGAGCACGCGATTAAAGACGTTCCTGACTCCTGCCTGCACGATAACGGCCGCTGCGAGCACTTCTGCGTGGAGGAGGACGGTCAGCGCAACTGTTCCTGTGTAGATGGATATATCCTAGCGTCAAATGGCCAGAGCTGCCTGACAAACGCCGCGCACTGCTTAGAAAACCTCAAAGTCAAGTTTCTCAAGATAGTCGCAGGTGAGCATGACATCGAGGTGGATGAAGGCACAGAACAGGTCATCCAGGTGGAGGAGATGCTCATGCACCCCGGCTATGTGTCCGAGACCGCAGACAGCGACATCGCCCTTTTGCGTCTGAGCAGGCCCATCGTCTACAGCACGTACGCCGTTCCCGTTTGCCTGCCTCTGCGCGACATGGCCGAGCGCGAGCTGTGGGCCGTCAGCAAGCACACGGTGAGCGGCTGGGGCAAACGCAGCGAGGGAGGACCCACCTCACGCTTACTGCGCCAGCTGCAGGTGCCGCGCATCCGCACGCAGGAGTGTGTCGAGAGCAGCAAAGTGTCGCTCACCAGCAACATGTTCTGTGCCGGTTACATCGAGGGAAAGGAGGACTCGTGTAAAGGGGACAGCGGTGGGCCGCTGGTGACCCGCTACAGGAACACCACGTTCCTGCTGGGGATCGTGAGCTGGGGGAAAGGCTGCGCCCGTCCGGGATCCTACGGCATCTACACGCGTGTCTCCAACTACCTGCAATGGATCCACGAACATACGGCGAATTCCACACAAATTAATCATTAAAGATTCTGCTCTATTTATGTCTGATTATGTCTGATTTCTTCTGTGTTTGGCATTTTTATCCTCTCAGTGGTTTGGCCCGTCATTACCTCATTCACAAATAAA

Function

symbol description
f7 Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Acts upstream of or within blood coagulation, fibrin clot formation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood plasma; liver; and yolk syncytial layer. Human ortholog(s) of this gene implicated in several diseases, including acute pancreatitis; artery disease (multiple); diabetes mellitus (multiple); factor VII deficiency; and obesity. Orthologous to human F7 (coagulation factor VII).

NR:

description
F7i protein, partial

GO:

id name namespace
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01320 F7; coagulation factor VII

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06295715_06298755.mRNA True 1241 mRNA 0.55 7 6295613 6298775

Neighbor

gene id symbol gene type direction distance location
CI01000299_06291499_06294321 F7 coding downstream 738 6290549 ~ 6294875 (-)
CI01000299_06281861_06289368 NA coding downstream 5588 6279383 ~ 6290025 (-)
CI01000299_06274590_06278765 PROZ coding downstream 16481 6274427 ~ 6279132 (-)
CI01000299_06268189_06268676 NA coding downstream 26218 6268189 ~ 6269395 (-)
CI01000299_06257032_06266210 CUL4A coding downstream 29403 6255857 ~ 6266210 (-)
CI01000299_06299968_06305021 NA coding upstream 121 6298896 ~ 6305158 (-)
CI01000299_06306931_06307410 NA coding upstream 7325 6306100 ~ 6307410 (-)
CI01000299_06310939_06311125 NA coding upstream 12164 6310939 ~ 6311229 (-)
CI01000299_06320613_06321046 NA coding upstream 21789 6320564 ~ 6321046 (-)
CI01000299_06337727_06341840 NA coding upstream 38364 6337139 ~ 6341840 (-)
G407939 NA non-coding downstream 63338 6226412 ~ 6232275 (-)
G407923 NA non-coding downstream 73234 6220766 ~ 6222379 (-)
G407975 NA non-coding downstream 112078 6183135 ~ 6183535 (-)
G407971 NA non-coding downstream 149689 6145497 ~ 6145924 (-)
G407895 NA non-coding downstream 181123 6108478 ~ 6114490 (-)
G407986 NA non-coding upstream 90601 6389376 ~ 6389644 (-)
G407927 NA non-coding upstream 93269 6392044 ~ 6392356 (-)
G408001 NA non-coding upstream 118351 6417126 ~ 6432767 (-)
G408009 NA non-coding upstream 140746 6439521 ~ 6439736 (-)
G408010 NA non-coding upstream 141472 6440247 ~ 6440470 (-)
G407805 NA other downstream 459624 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 839505 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1366795 4913373 ~ 4927715 (-)
G407413 NA other downstream 1744892 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 233226 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000007 f7 coding NC_007112.7 CM002885.2 119960 ~ 125246 (+)