CI01000299_06396938_06400105


Basic Information

Item Value
gene id CI01000299_06396938_06400105
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6396938 ~ 6401342 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06396938_06400105.mRNA
ATGGTTGTTGAAAGTTGCCGTGACCCGCGTTCAGACCCGCGAGCACCTGTTAATCCACGCAGTGATTACCCAGAGTGCTCTCGAGTGGCCGGCGCTTCCTTTCACAAGCATCCGCACGTACTGAGATATGTTGGGAAATTCTTCAGGAAACATGGGTCTGTAGACAGGGCCATTGAAATACTAAAGAAAGTTCTTAAATCAACAAATTCATGCTTCATTCATCATCATTTAGGAGTGTGCTACAAGAACAAGAAAATTAAATTAAACAAAGAAAAACGGGGCAAGTCTGAGATAGACGATATTCAAAATCAAAGCATCTACCACTTAGAAAAGGCAACTCGCCTAAAACCTTCCTTCATCTTTGCCATGAGTGAGCTCGCAGTTCAGTATGGAGAGAAAAGCATTTACGACAGCTAGAAAGAATAATGAGCACCTGAGTGAGGTCAGTTTTGACTATGCTCAGTTCCAGCAGTACAGTAAACGATGTGAGGATTTAGCAATCAAACACTACAAGGAGTGTTGGGCAGTGTATCCACATACCAGTGAGGGCAGGAAAAGTGCTTGGAAACAAAAGGAAATTGCTCAGAAATGCATCAGGTGTAACCCAAATGATCAGAAGCTTTGGGAAATACAGGAATTATTTCAGCAAGCAAAAGATGAGATGTTAGGCGACACGAGAGCGGGGCTAAGCCTTCAGGCAATGAAGAGGATGATAAACTTTGTGAATCTTTTTAGTAATATTAACTTTCTACAGTGATGTATAATTAGTTATTTAAAAAAAAACACTCATCCTCATTTCCCTATTTATGTGCACAGAAAACAGGTGCATACAGACAAATATTTGTTCTTGTTTTTCATTCTAATGTTGATAAATCTGGATTATTTTAAAGAATCGAGCATGTGCTGACAGCTAGTAATTTGTCCAAACCATGTCCATTTAACTTTACAACCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTTCATCCGTCCCCTTACTCTTTCAGTGTAAATTTCAAAACACTTTATTGGCATGATTTTTTTATACATATAATATTGCCAGAGCACTAATACACACAACAAATGAATAATATCTCTCTCACACTCTTTCACCAGAGCATGTGCCGCAAGATCTTTAAGTGAAGCAAAGTGTGTGTGCCACATCTACAGGCTGTAATTTTTCATGAATTTTTTACTATTGTTACTTAGAAATAATTAATACGTTTATAGTGTCTCTTAGTTATTCCATGTATAATAATATAGTCTACATTTTAAAAATTGAATGAAACATGAAAACATTCATATATGCAGATTTAAAATGGTTAATGAATGAGACCTAAAGGTAACAAGTGACAATAGTTATTGTTTTTTACCTTGTTACGAATCTGTTTGAATTATTCTTTTGTTACTATTATGGAAACATTGTGTTTTTGTGGGGAAAAACTAATGTATTAAAATGTATTAAAACAGATAACATAAAAAATCTGTCCTAACAAATTCTGTGCAGTTTGTGCTCTTTGTTCAAATAGCCTCTCCTTTAGTGAA

Function

NR:

description
Unknown (protein for IMAGE:7409475), partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06396938_06400105.mRNA True 1654 mRNA 0.37 2 6396938 6401342

Neighbor

gene id symbol gene type direction distance location
CI01000299_06322253_06326504 CREG1 coding upstream 70376 6322253 ~ 6326562 (+)
CI01000299_06312445_06318421 NA coding upstream 78517 6312040 ~ 6318421 (+)
CI01000299_06269853_06274289 PCID2 coding upstream 122545 6269602 ~ 6274393 (+)
CI01000299_06233485_06239858 NA coding upstream 157036 6232572 ~ 6239902 (+)
CI01000299_06223295_06227054 ADPRHL1 coding upstream 169752 6222892 ~ 6227186 (+)
CI01000299_06416707_06422267 NA coding downstream 15365 6416707 ~ 6422648 (+)
CI01000299_06424909_06425694 NA coding downstream 23469 6424811 ~ 6425733 (+)
CI01000299_06430810_06434834 NA coding downstream 26709 6428051 ~ 6435178 (+)
CI01000299_06439603_06455258 ILDR2 coding downstream 38261 6439603 ~ 6455462 (+)
CI01000299_06458969_06464458 NA coding downstream 56733 6458075 ~ 6464695 (+)
G406494 NA non-coding upstream 4582 6392080 ~ 6392356 (+)
G406480 NA non-coding upstream 73315 6323185 ~ 6323623 (+)
G406172 NA non-coding upstream 85239 6310408 ~ 6311699 (+)
G406142 NA non-coding upstream 110512 6279419 ~ 6286426 (+)
G406196 NA non-coding upstream 130708 6265754 ~ 6266230 (+)
CI01000299_06541306_06541820 NA non-coding downstream 139920 6541262 ~ 6541985 (+)
G406161 NA other upstream 96430 6237838 ~ 6300508 (+)
G406244 NA other upstream 1023359 5371181 ~ 5373579 (+)
G406096 NA other upstream 1469094 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1692313 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1891021 4480553 ~ 4493116 (+)

Expression


Co-expression Network