CI01000299_06416707_06422267


Basic Information

Item Value
gene id CI01000299_06416707_06422267
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6416707 ~ 6422648 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06416707_06422267.mRNA
GAGTGCAGGTGTCGTCTTCGGCCTTGACTGTAGATATCCCACAGAAAGATTATAAGATTGCCAGGGGTGATGATGTGACGATACCCTGCCAGTTTTTACCCCAAGGTGCGAGTGCACAAGTCCAAGTAACATGGACAGCAGCTCCAGCTGTGCCGGGAGATCCAGCGATCACCATCGTCACTTACTTCGGTCCCACTTCAATTAAAGTGACGACGAAATATAAAGGCAGGGTCAACCTATTACACGATATCCCAAATGGAAAAGCCGACCTGCAGCTCCTGAGAATAACTAGCTCAGACACACGCAGTTATGAGTGCAGAGTTGAGGTTATGAATAATGAAGAGGACGGTGTGTCTGACACGGCCAATCTCATAGTCTTGGTGGCTCCATCGCCGCCCATCTGCAAGATTGAAGGGGTGTCAGAATACTATCAGAACATCAACCTGACCTGTCGCTCGGAGGAGGGAACGCCCACACCAACCTACAAGTGGCAAAGATACGACACCACGAACAACGCTCGGCCGAACCCGCCCAAGACCACTGACATAAATGGAGTGCTGTCACTCTACAATATTACCGTAGAAACGTCCGGTTTCTTCATCTGCACGTCCACCAATGAGATCAAATCTGCAACGTGTAATCTGACCCTGGCCGTCATGCCACCGTCCATGAGCATGACCTCCATTGGAGGGATCATTGGGGCCATTGTGGCCGTGGCTCTTATCTTCGGAACCATCATCATCTGCTGCTATTGCTGTCGGAAGAAGGAAAAGGCTGAGGAATACAGGATGGGGTACGACAGCAGAACATGGACGCATCTCATCTATACACATAACTGATGGACTGGTCATGTAAGTGAACTGATGTGACATGAAGTATGACGTCCCACACTCGGAATTTGTGCTCTGCATTTCACCCATCCAAGTGCGCTCACACACACACACACACACACAGCAGTGAGTACTGAACATACACACACACACACACACACACACACACACACACACACACACACACACACACCTGGAGCAGTGGGCAGCCGTTTTTGCTGCGGCACTCAGGGAGTGATTGTGGGTTCGGTGTGTTGCTCGAGGGCTCCTCAGGTAATTTTTGGCTCAGTGTGACATCAGTCCTGTGTTCATCATGCTCGTAGGCACCTACACTGATAAATAGTTTGGAAAGATTGTAGTTTTGGACTAAAATGGACAATGTCTCTGTTA

Function

NR:

description
Sc:d0144 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06416707_06422267.mRNA True 1220 mRNA 0.50 5 6416707 6422648

Neighbor

gene id symbol gene type direction distance location
CI01000299_06396938_06400105 NA coding upstream 15365 6396938 ~ 6401342 (+)
CI01000299_06322253_06326504 CREG1 coding upstream 90145 6322253 ~ 6326562 (+)
CI01000299_06312445_06318421 NA coding upstream 98286 6312040 ~ 6318421 (+)
CI01000299_06269853_06274289 PCID2 coding upstream 142314 6269602 ~ 6274393 (+)
CI01000299_06233485_06239858 NA coding upstream 176805 6232572 ~ 6239902 (+)
CI01000299_06424909_06425694 NA coding downstream 2163 6424811 ~ 6425733 (+)
CI01000299_06430810_06434834 NA coding downstream 5403 6428051 ~ 6435178 (+)
CI01000299_06439603_06455258 ILDR2 coding downstream 16955 6439603 ~ 6455462 (+)
CI01000299_06458969_06464458 NA coding downstream 35427 6458075 ~ 6464695 (+)
CI01000299_06466541_06475063 TMEM39A coding downstream 43893 6466541 ~ 6475639 (+)
G406494 NA non-coding upstream 24351 6392080 ~ 6392356 (+)
G406480 NA non-coding upstream 93084 6323185 ~ 6323623 (+)
G406172 NA non-coding upstream 105008 6310408 ~ 6311699 (+)
G406142 NA non-coding upstream 130281 6279419 ~ 6286426 (+)
G406196 NA non-coding upstream 150477 6265754 ~ 6266230 (+)
CI01000299_06541306_06541820 NA non-coding downstream 118614 6541262 ~ 6541985 (+)
G406161 NA other upstream 116199 6237838 ~ 6300508 (+)
G406244 NA other upstream 1043128 5371181 ~ 5373579 (+)
G406096 NA other upstream 1488863 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1712082 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1910790 4480553 ~ 4493116 (+)

Expression


Co-expression Network