CI01000299_06439603_06455258 (ILDR2)


Basic Information

Item Value
gene id CI01000299_06439603_06455258
gene name ILDR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6439603 ~ 6455462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06439603_06455258.mRNA
ATGAAGCGAAAAACACGAGAAAAACACGGCCCAGATTCTGCGACGGGTCACGAAACGGAACAATTTATAAGGATTTCACTCGTCAGATGCTGGATTTCACTCATGGCGTTCACAGCGGTGTCGCGGTGTGAGGCCGTGCAGGTCTCTGTTCGTGACGAGCGGCGCTTTGCGATGCTGTTCCAGTCGGTGGTTCTGCCGTGTCAGTACAGCAGCGTCTCCACGCAGACTCCGGTCATCCAGTGGTGGTACAAGTCCTACTGCCGCGATCGCACGCGCGACGCCTTCCGCTTCCCCGACGCGCTGGCCGTCCACGGCTCTGAGCTCGGCTCTTCCGTTCACCTGGACTGCGGGGACAGCGGCCGGACGGTGCGCATCGTGGCGTCTGGACAGGGATCGTCCATCACCCTCGCCGAGCACTACAAGGGCCGAGACATCTCCATCATCAACAAGGCTGACCTGCGCATCGGTGAGCTGCAGTGGGGCGACAGCGGCGTTTACTACTGTAAAGTGGTGATCTCTGATGATCTGGAGGGTCAGAATGAAGCACACGTGGAGCTGCTTGTGTTGGGCTGTAGTTCATACAAACACCTCCTCACTGAGAAACTCCCAACACTGAGGAGATTAGAAACAGTAGTACATCTGTATCTGATCTTCTCGTCACTCACTAACACTGAACAAACTTCACTGAGGTCCATTACTGACCGCCAGAACGCATCGTACACATTCTGTCAAACGAGTGTTTCAGAGCGTCGCTGCATGTGTGTCCCGCTCACTGATGAACACAGCGCTGATGGTGATGATGGTGCTGACCGTGCCCGTGTTCTCTCTGCTAGAGTGGGTGTTTGTGGGCGCTGTGGTCGTGGGCAGTGCTCTGGCCATTCTGCTGTGTATGAAGCAGGAAAGGGGATCAAGACAGCAGTTCCCACACCAGTGCCCATGTTCCCTCCATACTACATACCTGGGATGCCCACCATGATGCCCATCGCCCCGCCCTCCCTCATTGACCCAAACCTGTCCACTGCACCATCACTGCAGCACAACGGCTCGGCAGTGCAGAGTGGTTTCCATCTGCAGTCGGTGTCAGATCAGAGCTCTCTGAAGGTGCTGCAGTACGTGGAGAAGCAGCTCGCTCAGTTCAACCCGTCTCAGACGCTTAGCAGCAGCCGAGACACCTGCAGTATGTCCGAGCTGAGTTCATTACATGATGCAGAAACGGACTTCCGTCAGACCTATCGACAAGTACAAAAAAAAGCTCTACCAGCCATCCCTGATCTCGACGACCCCACTGACCTCCGGACCACAGATTTATCTCCCGTTCACGAGGAAAGATTTACACGACAGCCACAGCAAAGAAATCATGTGGCAGACGACAACCCCAGGTGGAACCCTCGTTCAGAGCACCTGCAGAGGAAGGCTTTCCTGGAACGCGGACGGACCGGATCTTTGGATGAGCTGGAGGAGTTTGCGATGACATATATGCAGCGAGGACGTCACGGTGACCTGGGAAACAGGGAGGACGACTACAGAGCTCACGAACGGGAGCGCGAGAGGGAAAGAGAGCGAGAACGGGATCGCTATCCATTTTATTGTTCCAAACGTTACTCTCCAAAGGCCAGTCCGGTGAGACGCCCACCCAGCCCTCCGCCCCTACCTGGAAAAAGGCGGGACACGTGGGACAATGATCAACCCCAACGGGATCCACGAGAGCGGGATCAGAGAGATTCCAGTGGTACGGGGAGCAGAAGAGACTACGATGATGCCCTTCTCAACAATTTATTGGAACGTAAAGCTAAAGCTGGGAAGAGCGGTTCTTCAAAATTGGGCCGGACCGAAGAGGACTCGGACACGCCTTCCAGAAACAGCTCCAAAAAGACGAGTGAGCGTTTCCACAGCAGGTCTCCAAGCAACCAGTCACCTCGCCAGCGGACGGCGGAGGATAATGAATCCTTGCCACCCTACACAGAGAAGGAACTGGAGCGTTCCCGTGGAGCAGAGTCCGGACAACAACCTTTCTGCTACACGCGCTCCGGTCACGGCTCTACGCCGAGTGGGCAGGAGGAGCAGAACCGCCCTCGTAAAGTGACATTTTTTGATGAACAAAGTGCGCAGTTTGATTCCGACCTAGGTCTTTCGATCACGGTTCGATTTGTACCTCGATTTGACCACAGAAAATAACCTGTACACAGGTAACAAGAAAAAAATCAAACACATCTCTGCCTGCTTGCTGCTTAATTCCTCCCCAAAATGTGTTTGGATCACAGCTAAAACAGTGTATAAAATCTAATACTACTAACGACAGAAACGGTCCCTCAAAGCACTAAGAAATGTTGAAAAAGAAATATTTAAAGGTCAGGCATTGATAAAATGTGTGTAGCAAAA

Function

symbol description
ildr2 Acts upstream of or within endoderm development and pancreas development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including blood vessel; intestine; nervous system; optic vesicle; and ventral mesoderm. Orthologous to human ILDR2 (immunoglobulin like domain containing receptor 2).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06439603_06455258.mRNA True 2379 mRNA 0.53 11 6439603 6455462

Neighbor

gene id symbol gene type direction distance location
CI01000299_06430810_06434834 NA coding upstream 4425 6428051 ~ 6435178 (+)
CI01000299_06424909_06425694 NA coding upstream 13870 6424811 ~ 6425733 (+)
CI01000299_06416707_06422267 NA coding upstream 16955 6416707 ~ 6422648 (+)
CI01000299_06396938_06400105 NA coding upstream 38261 6396938 ~ 6401342 (+)
CI01000299_06322253_06326504 CREG1 coding upstream 113041 6322253 ~ 6326562 (+)
CI01000299_06458969_06464458 NA coding downstream 2613 6458075 ~ 6464695 (+)
CI01000299_06466541_06475063 TMEM39A coding downstream 11079 6466541 ~ 6475639 (+)
CI01000299_06532144_06534604 RPL24 coding downstream 76682 6532144 ~ 6534631 (+)
CI01000299_06541306_06541820 NA coding downstream 85844 6541262 ~ 6541985 (+)
CI01000299_06556313_06564020 NA coding downstream 100851 6556313 ~ 6564237 (+)
G406494 NA non-coding upstream 47247 6392080 ~ 6392356 (+)
G406480 NA non-coding upstream 115980 6323185 ~ 6323623 (+)
G406172 NA non-coding upstream 127904 6310408 ~ 6311699 (+)
G406142 NA non-coding upstream 153177 6279419 ~ 6286426 (+)
G406196 NA non-coding upstream 173373 6265754 ~ 6266230 (+)
G406161 NA other upstream 139095 6237838 ~ 6300508 (+)
G406244 NA other upstream 1066024 5371181 ~ 5373579 (+)
G406096 NA other upstream 1511759 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1734978 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1933686 4480553 ~ 4493116 (+)

Expression


Co-expression Network