G403578


Basic Information

Item Value
gene id G403578
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 35462 ~ 72271 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU463894
CATCACACTCACACTATTTAAGACACACACACACACACACACACCGCGAAGTCTTGATTTGCTGTGGTGATCATTTCTGAGCGTTTTTCTGTGGACTGTTTACCTGTTACCGATTGGATTGTTTATTCCCTGCGACCCTTTGCTGCCTACCCTGATCTTCGCCTGTTTCCTGGACTGTGATTGTTTGCTGCCTGCCCTGATCCTTGCCTGTACCCTGATTCTGTTTGTCTGCCGCCTGCCTCGACCATTGCCTGTTCCTGTTTATGCCTCTGCCTTTGCCCTGTCTGCTCTGTTGATTTCACTTGCTTAAAGTGAGATACAAGTCAACCGTGTTCCAGGACAGAGCTGATGTAAATATATTGAAGGGGAAAAACAAACAAAAAATGGGAGGATCAGAATCAAAGTCAGTGCAACAAGTGACCCAATCAATAGTGCATCAATCAAAACCAAATCCAGAACTGGATAAACCATGGAGGAAATTCGACTGGGGACAGAAAGAAGCTCTGAAAAAGAAGCTGGAAAACTTCTCTCCGAGTGATCCAAATGTAAACGACATCAAGATCCTGGTAGCTGGACAAGTTGGAGCAGGAAAGTCCAGCTTTATCAACTCCATCGATAGTGTCTTTCAAGGACGGATCTGCTCTAGAGCACTAGTTAATACAGCTGATGGTGACAGTCGTAGTTTCACACAAAAGCTCAAAGGATTCCCCATCAGAAGTGGGAGAAAAACTTTGCCTTTCGTCTTCAAGGATATAATGGGCTTAGAAGCTGAAGCTTTGGCTGGGTCACAAACAGATGACATCATCAATGCTGTGTTTGGCCATGTGAAGGACGGCTATAAATTCAACCAGGAGCAGGCACTCACTTATAAGGATCAGCATTACACCAGTGACCCTACCCTCTCCGATCAGGCTTTCTGCCTGGTTTATGTCATANN
>TU463889
AGTGAGATACAAGTCAACTGTGTTCCAGGATGATGTAAATATATCGAAGGGGGAAAAACAAACAAAAAATGGGAGGATCAGAATCAAAGCCAATGCAACAAGAAGTGCATCAACCAAAACCAAATCCAGAACTGGATGAACCATGGAGGAAATTTGACTGGGGACAGAAAGAAGCTCTGAAAGAAAAGCTGGAAAACTTCTCTCTGAGTGATCCAGATGTAAACCACATCAAGATCCTGGTAGCTGGACAAGTTGGAGCAGGAAAGTCCAGTTTTATCAACTCCATCGATAGTGTCTTTCAAGGACGGATCTGCTCTAGAGCGTTAGTTAATACAGCTGCTGGTGACAGTCGTAGTTTCACACAAAAGCTCAAAGGATTCCCCATCAGAAGTGGGAGAAAATCTTTGCCTTTCGTCTTCAAGGATATAATGGGCTTAGAAGCTGAAGCTTTGGCTGGGTCACAAACAGATGACATTATCAATGCTCTGTTTGGCCATGTGAAGGACGGCTATAAATTCAACCAGGAGCAGGCACTCACTTATAAGGATCAGCATTACACCAGTGACCCTACCCTCTCCGATCAGGCTTTCTGCCTGGTTTATGTCATANN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU463894 True 386 TUCP 0.45 2 35462 72271
TU463889 True 95 TUCP 0.43 1 72177 72271

Neighbor

gene id symbol gene type direction distance location
CI01000299_00013442_00032151 NA coding upstream 2388 12783 ~ 33074 (+)
CI01000299_00005753_00010092 NA coding upstream 25237 5635 ~ 10225 (+)
CI01000299_00082987_00089134 NA coding downstream 10452 82723 ~ 89594 (+)
CI01000299_00097393_00132755 NA coding downstream 25122 97393 ~ 132755 (+)
CI01000299_00151569_00153623 SLC5A3A coding downstream 79248 151519 ~ 154472 (+)
CI01000299_00255175_00294177 MBNL2 coding downstream 182904 255175 ~ 294177 (+)
CI01000299_00315123_00328550 RAP2B, RAP2C, RAP2A, RAP2AB, RAP2A.S coding downstream 242852 315123 ~ 330163 (+)
G403952 NA non-coding downstream 478230 550501 ~ 550742 (+)
G403965 NA non-coding downstream 510485 582756 ~ 583123 (+)
G403971 NA non-coding downstream 530561 602832 ~ 603583 (+)
G404016 NA non-coding downstream 577144 649415 ~ 649814 (+)
G404137 NA non-coding downstream 998337 1070608 ~ 1075893 (+)
G403609 NA other downstream 291868 364139 ~ 410788 (+)
G403972 NA other downstream 532599 604870 ~ 606350 (+)
G405609 NA other downstream 3082326 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 4058987 4131060 ~ 4133941 (+)
G405842 NA other downstream 4223262 4295533 ~ 4320141 (+)

Expression


Co-expression Network