G405609


Basic Information

Item Value
gene id G405609
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3154597 ~ 3155174 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466101
GGGGAGCGAAGGCTGGCCTGTGTGGTTCGATCCAACACATGACACCAGGATGCACTATGGGAAGAAGGCAAGCTGGCGGAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGATCCATGTAGATGTTACTTTGACACGTACCACCTACCTAAGCATTGTTGCAGACCATGTACACCCTTTCATGGAAACGGTATTCCCTGGTGGCTGTGGCCTCTTTCAGCAGGATAATGCGCCCTGCCACAAAGCAAAAATGGTTCAGGAATGGTTTGAGGAGCACAACAACAAGTTTGAGGTGTTGACTTGGCCTCCAAATTCCCCAGATCTCAATCCAATCGAGCATCTGTGGGATGTGCTGAACAAACAAGTCCGATCCATGGAGGCTCCACCTCGCAACTTACAGGACTTAAATGATCTGCTGCTAACATCTTGGTGCCAGATACCACAGCACACCTTCAGGGGTCTAGTGGAGTCCATGCCTCGACAGGTCAGGGCTGTTTTGGCAGCAAAAGGGGGACCAACACAATATTTGGAAGGTGGTCATAATGTTATGCCTGATCGGTGTATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466101 True 578 TUCP 0.50 1 3154597 3155174

Neighbor

gene id symbol gene type direction distance location
CI01000299_03144958_03149338 NA coding upstream 5257 3144390 ~ 3149340 (+)
CI01000299_02813216_02818668 CPO coding upstream 335501 2813141 ~ 2819096 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding upstream 393644 2753238 ~ 2760953 (+)
CI01000299_02706136_02711943 STK16 coding upstream 440857 2705873 ~ 2713740 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding upstream 450377 2696632 ~ 2704220 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding downstream 2017 3157191 ~ 3166701 (+)
CI01000299_03170577_03174986 CNPPD1 coding downstream 15403 3170577 ~ 3175003 (+)
CI01000299_03176677_03185710 PRKAG3A coding downstream 21503 3176677 ~ 3186067 (+)
CI01000299_03189537_03200831 FAM134A coding downstream 34145 3189319 ~ 3201406 (+)
CI01000299_03215678_03230586 NA coding downstream 60504 3215678 ~ 3230586 (+)
G405407 NA non-coding upstream 343925 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 424088 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 433273 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 439456 2659354 ~ 2715141 (+)
G405366 NA non-coding upstream 499184 2655180 ~ 2655413 (+)
G405611 NA non-coding downstream 53752 3208926 ~ 3209411 (+)
G405618 NA non-coding downstream 165350 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 166021 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 179053 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 251411 3406585 ~ 3406810 (+)
G403972 NA other upstream 2548247 604870 ~ 606350 (+)
G403609 NA other upstream 2743809 364139 ~ 410788 (+)
G403578 NA other upstream 3082326 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 976084 4131060 ~ 4133941 (+)
G405842 NA other downstream 1140359 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1334644 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1547208 4703071 ~ 4704780 (+)
G406096 NA other downstream 1769288 4924462 ~ 4927844 (+)

Expression


Co-expression Network