G405611


Basic Information

Item Value
gene id G405611
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3208926 ~ 3209411 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466103
CTGCTGTTTTTACCGACAACTTCTGCGCAAGCTGAGTTCTTGCCTCGCATTCCAGCTGCGTTGTCATCGCCACAAAGTTGTGCGGGTCAACAGAGGGTGCGTTCTCAATTAACAGCGAGCACTTCAGATTAATAAAGGAGTCTCCCGCCACGATCACTCGTACGTCTTTCCGTGCATTCGCCTCGATGAGTTGCCCATAGCAACAGAAACATTCTGCAACCCGGCTCACCATGTGGTCCTTGTCATCCGGCTCATCGTTACTTTCACATATAGGCTGCAGGTCATCCAGAAAGATGATGAAGTGGGCTTCCTGAAACGCCTGTGTCTGGTCTGAATGGACAGTGACCTCATGGAGCTGAGGTAGGGCGAGGTCTTCCGTTTCCATCTTGAGTCCTCGTAACATTTCCTCAGAGCCGCAGGTGTCCATGAGGTGAAGGCTGAAAAGGGGGAGACCTGGAAACAGTCCCGGGGTGAACAACTGAGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466103 True 486 lncRNA 0.52 1 3208926 3209411

Neighbor

gene id symbol gene type direction distance location
CI01000299_03189537_03200831 FAM134A coding upstream 7520 3189319 ~ 3201406 (+)
CI01000299_03176677_03185710 PRKAG3A coding upstream 22859 3176677 ~ 3186067 (+)
CI01000299_03170577_03174986 CNPPD1 coding upstream 33923 3170577 ~ 3175003 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding upstream 42225 3157191 ~ 3166701 (+)
CI01000299_03144958_03149338 NA coding upstream 59586 3144390 ~ 3149340 (+)
CI01000299_03215678_03230586 NA coding downstream 6267 3215678 ~ 3230586 (+)
CI01000299_03237334_03244737 GTF3C3 coding downstream 27923 3237334 ~ 3244815 (+)
CI01000299_03267154_03267336 NA coding downstream 57743 3267154 ~ 3267391 (+)
CI01000299_03268500_03312490 HECW2 coding downstream 58782 3268193 ~ 3313328 (+)
CI01000299_03366963_03373293 NA coding downstream 157407 3366818 ~ 3373682 (+)
G405407 NA non-coding upstream 398254 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 478417 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 487602 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 493785 2659354 ~ 2715141 (+)
G405366 NA non-coding upstream 553513 2655180 ~ 2655413 (+)
G405618 NA non-coding downstream 111113 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 111784 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 124816 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 197174 3406585 ~ 3406810 (+)
G405663 NA non-coding downstream 201123 3410534 ~ 3410764 (+)
G405609 NA other upstream 53752 3154597 ~ 3155174 (+)
G403972 NA other upstream 2602576 604870 ~ 606350 (+)
G403609 NA other upstream 2798138 364139 ~ 410788 (+)
G403578 NA other upstream 3136655 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 921847 4131060 ~ 4133941 (+)
G405842 NA other downstream 1086122 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1280407 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1492971 4703071 ~ 4704780 (+)
G406096 NA other downstream 1715051 4924462 ~ 4927844 (+)

Expression


Co-expression Network