G405842


Basic Information

Item Value
gene id G405842
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4295533 ~ 4320141 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466350
AGTGTTGTTACCATGCCGTCATTTTACACCGGACTGCTTCACAAACGAGGGTCAATTCAACACTGGATTTGCACAAAAGATTAACATGACGGCACATGCTAGTCGATGAGTTGAATCAACTCCACAGCAACTACATACATTTATCCACTAACCATTCAGAAACGTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTTAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGAAGCGTGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACAAAAACGCTGTGTTTTTACTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466350 True 448 TUCP 0.44 2 4295533 4320141

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 25768 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 32040 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 161731 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 169152 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 180306 4105476 ~ 4115227 (+)
CI01000299_04472181_04474247 NA coding downstream 150815 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 160412 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 176245 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 193217 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 211957 4532098 ~ 4539919 (+)
G405837 NA non-coding upstream 9973 4285224 ~ 4285560 (+)
G405833 NA non-coding upstream 13903 4281424 ~ 4281630 (+)
G405831 NA non-coding upstream 17797 4277378 ~ 4277736 (+)
G405829 NA non-coding upstream 40519 4254714 ~ 4255014 (+)
G405828 NA non-coding upstream 41469 4253762 ~ 4254064 (+)
G405905 NA non-coding downstream 68310 4388451 ~ 4388657 (+)
G405906 NA non-coding downstream 69573 4389714 ~ 4390144 (+)
G405908 NA non-coding downstream 70990 4391131 ~ 4391513 (+)
G405909 NA non-coding downstream 73323 4393464 ~ 4395443 (+)
G405910 NA non-coding downstream 80438 4400579 ~ 4403306 (+)
G405609 NA other upstream 1140359 3154597 ~ 3155174 (+)
G403972 NA other upstream 3689183 604870 ~ 606350 (+)
G403609 NA other upstream 3884745 364139 ~ 410788 (+)
G403578 NA other upstream 4223262 35462 ~ 72271 (+)
CI01000299_04703290_04704365 NA other downstream 382241 4703071 ~ 4704780 (+)
G406096 NA other downstream 604321 4924462 ~ 4927844 (+)
G406244 NA other downstream 1051040 5371181 ~ 5373579 (+)
G406161 NA other downstream 1917697 6237838 ~ 6300508 (+)

Expression


Co-expression Network