G405876


Basic Information

Item Value
gene id G405876
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4418304 ~ 4448995 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466393
TCTGACAGGATTGAGTGTCTCGCATGAGTATGTTTTATTCTCCTGTACTTGAGTAGATGACAAGAACACTTGAGGATTTGTTTCATTCTGGATGAGTTTTCCATCTTCATACCAGGATACAGTCAGACTCGGATCTTTACTGTTTTCCACGTCACAGGTGAGAGCAGCATTCCCATCAGCGGTGCAGTTGATCTTCACAGTAGGTTTAGGGACCTTTTCTGTAACAGCGACATTGTGGTTATTTCCTACTACTGTAACTACTATCAAATTTTCAATCTTATTTTGTTATTATTATTGTGTTGGAAAGGTAGAAATATTTGTCATCTTACCATATACTTTAATTTTCACTCCAGCTTTACCAATCTCTGTACCATCAGAACTAGTAACAGTGTATATATATGTGCCCGTGTCCTTCAGACTAACACTTTGAAATCTTAATGATCCATCTTCTTCCACTGTTAAACCTGGAGTGTTTGACTTCACCTTCTTGTTTTTCCTCTCAATTACGGCGTCACTGGAGGAATGGGTCCATTTGATGTCATTGGATTTGTCATTGTATTTTTCTGGTAGCTTAATGATGCAGGACGTTCCCTCTAGTAGATCTTTTCCACATGTCTCTGTTGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466393 True 626 lncRNA 0.39 2 4418304 4448995

Neighbor

gene id symbol gene type direction distance location
CI01000299_04269257_04269673 NA coding upstream 148539 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 154811 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 284502 4131060 ~ 4133941 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding upstream 291923 4122601 ~ 4126381 (+)
CI01000299_04105476_04115171 LANCL1 coding upstream 303077 4105476 ~ 4115227 (+)
CI01000299_04472181_04474247 NA coding downstream 21961 4470956 ~ 4474271 (+)
CI01000299_04480751_04492829 NA coding downstream 31558 4480553 ~ 4493116 (+)
CI01000299_04496757_04504238 NA coding downstream 47391 4496386 ~ 4504483 (+)
CI01000299_04513358_04524537 NA coding downstream 64363 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 83103 4532098 ~ 4539919 (+)
G405912 NA non-coding upstream 3293 4414792 ~ 4415011 (+)
G405910 NA non-coding upstream 14998 4400579 ~ 4403306 (+)
G405909 NA non-coding upstream 22861 4393464 ~ 4395443 (+)
G405908 NA non-coding upstream 26791 4391131 ~ 4391513 (+)
G405906 NA non-coding upstream 28160 4389714 ~ 4390144 (+)
G405931 NA non-coding downstream 4597 4453592 ~ 4453869 (+)
G405932 NA non-coding downstream 6451 4455446 ~ 4455685 (+)
G405938 NA non-coding downstream 26993 4475988 ~ 4550799 (+)
G405865 NA non-coding downstream 200941 4649936 ~ 4665044 (+)
G405842 NA other upstream 98163 4295533 ~ 4320141 (+)
G405609 NA other upstream 1263130 3154597 ~ 3155174 (+)
G403972 NA other upstream 3811954 604870 ~ 606350 (+)
G403609 NA other upstream 4007516 364139 ~ 410788 (+)
CI01000299_04703290_04704365 NA other downstream 253387 4703071 ~ 4704780 (+)
G406096 NA other downstream 475467 4924462 ~ 4927844 (+)
G406244 NA other downstream 922186 5371181 ~ 5373579 (+)
G406161 NA other downstream 1788843 6237838 ~ 6300508 (+)

Expression


Co-expression Network