G406096


Basic Information

Item Value
gene id G406096
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4924462 ~ 4927844 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466651
AAGACGTGGAGGTGTCTTGCTGGCACTACGTCGAGTTCTGGACGTTGATCTTTTCTTGCGGAGAATGAGGACCGGAGAGCGACTGGGTTCTCGCTTCCATCTGTCCCGCTGATTTAGCGATCGGCTTCCGAAACCTCTTTTCCAGCGTGAGCTGGATCGAGATCTCCTCCTCGAATGCGAGCGAGACCTCTTTCTTGATTTAGACCGTCTGCTTCTGTCTGGAGTTCGAGATTTTCTCCTACGGCCTTGTGAGCGAGATCTCGATCTTCTCTTTTTGGGTGACCTCGATTTCGAACGTTTGCTCTTTGTTCTGGACTTGTGTGATTTTCTTTCAGAGGGCGATCGAGACTTTCGTGAAGACGACCTGGATTTTCTCTTTTTCGATAATGACTTTGATCTGGATCGTGTAGTTACTTTGGATCTTGAGGACGTTTGTTGACTGGGAGATTTGGATGGTGAGGTTGAGTTCCTCTCGATTGAAGTCTCTACACCGGTTATTGGATTTGTGTTGGTTTCTTTCTTGTCAGGGTTGGCAGCGCACTCTGAATCTTTTGGCGTAACGGTTGAAAACGTTGAGGGTTCTTCAGATACACTGGTCACTTCCAAAGGCACCTCAGGTGTAATGCACTTTTGGGAAGACTTGGTCTCAGATGGCTCTGCCAAGAAGGGAACTGGTCGCCAAGATCCTGTGACGCCAACTGCGTTGAAACCAGAACTCGTGCTGATGGACGCAACCTCAAACAACTTGCTGTCAGAGTTCACAGGCATTGTTGGACTTCTTCCATTCTCAGTTGTATTCTGAGACATTTCCATTGCACAGCTTGTATTACTGTCCACTGCTGGATCTGTATCATTCTTAACTGATTCAGTTTCCTTCAGACTTTCTTTCAGATCAGACCTTGATTTTGAAACGGACCTTGATTTAGAAGGTTTCGTTCTACTTCGAGACTTACTTTTGGAACGCCGTGGCGAACGAGACCTAGTTTTTGACACGGACCTTCTGTTCTTCCTCGAGATCACAATAGACCTTGATCTAGTTCGCCTGGAGTGCGACCTGGATCTTGAATGTTTACCTCTTCTGACAGAATGAGACCTGGACCGATTGTTGCGTCTCTTTGACCTTGATCTACTTCTCTCTCTCTGTTGATGAGACCTCTTTTTGGAGCTATTTCTAGAGCGGGAGGTTGACTTTGATCGCCGTTGTCGTTTTGAAGACCGGGATCTTGATCTCCGTCCTGACTTCCATCGGGGTGATCTTGATCCTCTAGAAGTCTCCTTACTTTTAGATATTCTGCTAGAACTTGTTTTCTTATCCTTGGGCCTTTCGTTTTCAGTGCCTTTGTGGACAGAATTCTCCATCTTGGGAATAATGTCAGGCAAAACATCAGATGTGTCTTTGAGCTCAGACTTTAAAATCTTACCTGCTGAAGAGGACTTAGTATTTTCATTAGAAGGTTTTGATTCAGACTCAGATTCAGAACCAGATGCTGAAGAGCTTTCAGACCGTGAGCCAGACCTCTTCGCTTTGTCTGCATCTTTGCTTTTTTTCTTCTTCTTTCTCTTCTTTTTCTTTCCACTTCGTGCGTCTCTTTGTCGGACTCAGACTCAGAGCTGCTGTCTTTTCCTTCTTTCCGTTTCTTTCTCTTCTTTTTGCTTTTGTGTTTTTTGTGCTTTTTACTCTTCCTGTGTTTAGTGCTGGTGTCCTCTTTACCATGGTTATCTTGGAGGTCAGTATGTGTGATTTTATCTGCAGTGAAAGCAAAGACTTATTAGTGACAAAATATATATGTCAGAAAACACAAAAAACATAGGTGTATTGACGACTAACCTGTTGGTGTGTTAATTTTTTCTTCCTTTAGTCCATCTTCTATCATCTCTGTCACAGGTTCAGACTGTGGCTCATCTGTCACACTGAATGAAAAAACATTTTATTACTCATTTAAAACACGATGTAGATGTAGATGTAGATTAAGTCCATTGTCTTTGTTGATTCCCAACACGTGTCTGTCATCCACAATGTATAATTCAACAGAATTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466651 True 2040 TUCP 0.44 2 4924462 4927844

Neighbor

gene id symbol gene type direction distance location
CI01000299_04906697_04907091 NA coding upstream 14389 4906697 ~ 4910073 (+)
CI01000299_04892566_04900169 NA coding upstream 23926 4890391 ~ 4900536 (+)
CI01000299_04864582_04885052 RUNX1 coding upstream 39077 4864192 ~ 4885385 (+)
CI01000299_04819297_04829755 NA coding upstream 94475 4818685 ~ 4829987 (+)
CI01000299_04736806_04740333 CLIC6 coding upstream 183487 4736806 ~ 4740975 (+)
CI01000299_05128395_05192154 NA coding downstream 200504 5128348 ~ 5192994 (+)
CI01000299_05254419_05314859 NA coding downstream 326575 5254419 ~ 5316243 (+)
CI01000299_05331367_05364944 NA coding downstream 403357 5331201 ~ 5364977 (+)
CI01000299_05392812_05418070 GART coding downstream 464848 5392692 ~ 5418352 (+)
CI01000299_05619817_05725510 NA coding downstream 691860 5619704 ~ 5727439 (+)
G406023 NA non-coding upstream 158239 4690895 ~ 4766223 (+)
CI01000299_04703290_04704365 NA non-coding upstream 219682 4703071 ~ 4704780 (+)
G405967 NA non-coding upstream 252567 4671525 ~ 4671895 (+)
G405966 NA non-coding upstream 252980 4671215 ~ 4671482 (+)
G405999 NA non-coding downstream 6471 4934315 ~ 4936448 (+)
G406101 NA non-coding downstream 28306 4956150 ~ 4956356 (+)
G406134 NA non-coding downstream 328895 5256739 ~ 5257212 (+)
G406203 NA non-coding downstream 384324 5312168 ~ 5745426 (+)
G405992 NA non-coding downstream 448423 5376267 ~ 5379015 (+)
CI01000299_04480751_04492829 NA other upstream 418545 4480553 ~ 4493116 (+)
G405842 NA other upstream 604321 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 790521 4131060 ~ 4133941 (+)
G405609 NA other upstream 1769288 3154597 ~ 3155174 (+)
G406244 NA other downstream 443337 5371181 ~ 5373579 (+)
G406161 NA other downstream 1309994 6237838 ~ 6300508 (+)

Expression


Co-expression Network