G406315


Basic Information

Item Value
gene id G406315
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5552642 ~ 5554868 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466892
CCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTTGCGAACTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCGGCTCATTTGCATTTAAAGGGACACACACAAAAATGGCGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGGAGACACCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466892 True 233 lncRNA 0.46 2 5552642 5554868

Neighbor

gene id symbol gene type direction distance location
CI01000299_05392812_05418070 GART coding upstream 134290 5392692 ~ 5418352 (+)
CI01000299_05331367_05364944 NA coding upstream 187665 5331201 ~ 5364977 (+)
CI01000299_05254419_05314859 NA coding upstream 236399 5254419 ~ 5316243 (+)
CI01000299_05128395_05192154 NA coding upstream 359648 5128348 ~ 5192994 (+)
CI01000299_04906697_04907091 NA coding upstream 642569 4906697 ~ 4910073 (+)
CI01000299_05619817_05725510 NA coding downstream 64836 5619704 ~ 5727439 (+)
CI01000299_05732790_05737401 N6AMT1 coding downstream 177922 5732790 ~ 5737802 (+)
CI01000299_05778912_05790662 NA coding downstream 223695 5778563 ~ 5790755 (+)
CI01000299_05799020_05801977 NA coding downstream 244074 5798942 ~ 5802114 (+)
CI01000299_05816534_05817445 NA coding downstream 261666 5816534 ~ 5817456 (+)
G405987 NA non-coding upstream 122997 5424589 ~ 5429645 (+)
G405992 NA non-coding upstream 173627 5376267 ~ 5379015 (+)
G406134 NA non-coding upstream 295430 5256739 ~ 5257212 (+)
G406101 NA non-coding upstream 596286 4956150 ~ 4956356 (+)
G405999 NA non-coding upstream 616194 4934315 ~ 4936448 (+)
G406354 NA non-coding downstream 79880 5634748 ~ 5639866 (+)
G406189 NA non-coding downstream 201909 5756777 ~ 5827969 (+)
G406164 NA non-coding downstream 204356 5759224 ~ 5762316 (+)
G406210 NA non-coding downstream 275216 5830084 ~ 5831741 (+)
G406417 NA non-coding downstream 344789 5899657 ~ 5899988 (+)
G406244 NA other upstream 179063 5371181 ~ 5373579 (+)
G406096 NA other upstream 624798 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 848017 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1046725 4480553 ~ 4493116 (+)
G405842 NA other upstream 1232501 4295533 ~ 4320141 (+)
G406161 NA other downstream 682970 6237838 ~ 6300508 (+)

Expression


Co-expression Network