G406417


Basic Information

Item Value
gene id G406417
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5899657 ~ 5899988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467011
TCCGTCAGTATTAGTACACGACGTAACTACAGAACAGTCAAGTTTTAAATAGGAAAAATATCGAAACTCTTTGGTCATTTTTGAGCGAGATGCTAACGGTCTAATCAGATTCAATGAACTATGCTAAGCTATGCTAAAAGTGGTACCGCCAGACCCAGAGATCGGCTGAATGGATTCGAAAACGGTAAAACTCAACTGTTTAACTCTAGGGGAGTGTTCCTTTAAGACGAATCCGTATGGACATTTGGCCGGAAGCTAGATATTTTACTTTATTAACTGTTAAATATGGATATTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467011 True 298 lncRNA 0.38 2 5899657 5899988

Neighbor

gene id symbol gene type direction distance location
CI01000299_05864998_05873333 NA coding upstream 26142 5863634 ~ 5873515 (+)
CI01000299_05844429_05845510 NA coding upstream 53992 5844161 ~ 5845665 (+)
CI01000299_05836707_05843149 NA coding upstream 56063 5836301 ~ 5843594 (+)
CI01000299_05816534_05817445 NA coding upstream 82201 5816534 ~ 5817456 (+)
CI01000299_05799020_05801977 NA coding upstream 97543 5798942 ~ 5802114 (+)
CI01000299_05903841_05913302 NA coding downstream 1476 5901464 ~ 5915312 (+)
CI01000299_05925030_05926229 NA coding downstream 24682 5924670 ~ 5926297 (+)
CI01000299_05935373_05943285 ERCC5 coding downstream 34915 5934903 ~ 5943413 (+)
CI01000299_05955084_05970603 NA coding downstream 54228 5954216 ~ 5971417 (+)
CI01000299_05988564_06002758 NA coding downstream 88107 5988095 ~ 6003021 (+)
G406210 NA non-coding upstream 67916 5830084 ~ 5831741 (+)
G406189 NA non-coding upstream 71688 5756777 ~ 5827969 (+)
G406164 NA non-coding upstream 137341 5759224 ~ 5762316 (+)
G406354 NA non-coding upstream 259791 5634748 ~ 5639866 (+)
G406315 NA non-coding upstream 344789 5552642 ~ 5554868 (+)
G406168 NA non-coding downstream 28194 5928182 ~ 5929929 (+)
G406427 NA non-coding downstream 48710 5948698 ~ 5948928 (+)
G406213 NA non-coding downstream 113420 6013408 ~ 6015647 (+)
G406220 NA non-coding downstream 125063 6025051 ~ 6025357 (+)
G406458 NA non-coding downstream 233855 6133843 ~ 6134043 (+)
G406244 NA other upstream 526078 5371181 ~ 5373579 (+)
G406096 NA other upstream 971813 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1195032 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1393740 4480553 ~ 4493116 (+)
G405842 NA other upstream 1579516 4295533 ~ 4320141 (+)
G406161 NA other downstream 337850 6237838 ~ 6300508 (+)

Expression


Co-expression Network