G406427


Basic Information

Item Value
gene id G406427
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5948698 ~ 5948928 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467021
GTCAGAGATCCGGTCTGATCCAGCTTCAGTCTGCCTCTGAATCTCCCATCAGCAACATCATCATAAAACGTGTCTTTATTGTTCTGCCTGTTGATTTGAGCTATGAGGATGTTCTTGTGTCCAAACTTCCACTCGATCTCTTTATTTCCCCCTATTTCAGTAAGATCAGGGTTTAGAGTGACTGATTTTCCCTCCAACACTGACACCGACTTCACTGCATCAACACCGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467021 True 231 lncRNA 0.45 1 5948698 5948928

Neighbor

gene id symbol gene type direction distance location
CI01000299_05935373_05943285 ERCC5 coding upstream 5285 5934903 ~ 5943413 (+)
CI01000299_05925030_05926229 NA coding upstream 22401 5924670 ~ 5926297 (+)
CI01000299_05903841_05913302 NA coding upstream 33386 5901464 ~ 5915312 (+)
CI01000299_05864998_05873333 NA coding upstream 75183 5863634 ~ 5873515 (+)
CI01000299_05844429_05845510 NA coding upstream 103033 5844161 ~ 5845665 (+)
CI01000299_05955084_05970603 NA coding downstream 5288 5954216 ~ 5971417 (+)
CI01000299_05988564_06002758 NA coding downstream 39167 5988095 ~ 6003021 (+)
CI01000299_06018839_06023448 NA coding downstream 69911 6018839 ~ 6023510 (+)
CI01000299_06029307_06034445 NA coding downstream 80029 6028957 ~ 6034956 (+)
CI01000299_06074050_06097303 RASA3 coding downstream 125122 6074050 ~ 6097533 (+)
G406168 NA non-coding upstream 18769 5928182 ~ 5929929 (+)
G406417 NA non-coding upstream 48710 5899657 ~ 5899988 (+)
G406210 NA non-coding upstream 116957 5830084 ~ 5831741 (+)
G406189 NA non-coding upstream 120729 5756777 ~ 5827969 (+)
G406164 NA non-coding upstream 186382 5759224 ~ 5762316 (+)
G406213 NA non-coding downstream 64480 6013408 ~ 6015647 (+)
G406220 NA non-coding downstream 76123 6025051 ~ 6025357 (+)
G406458 NA non-coding downstream 184915 6133843 ~ 6134043 (+)
G406463 NA non-coding downstream 186961 6135889 ~ 6136121 (+)
G406461 NA non-coding downstream 200671 6149599 ~ 6151122 (+)
G406244 NA other upstream 575119 5371181 ~ 5373579 (+)
G406096 NA other upstream 1020854 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1244073 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1442781 4480553 ~ 4493116 (+)
G405842 NA other upstream 1628557 4295533 ~ 4320141 (+)
G406161 NA other downstream 288910 6237838 ~ 6300508 (+)

Expression


Co-expression Network