G406463


Basic Information

Item Value
gene id G406463
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6135889 ~ 6136121 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467057
GACACCTTCACCCCTTATTCAAAGATTGTTAAAGGTTTTGTAATCATATTGTGTAGTTGTGCTTGGAGTCGATTTTTTATAACAACAAAATGTTTGGCCAGAGAAATTATGAAAATGCGAAAACAAGAGAGAACCAACAAAATATTAATAACTGATTATGTTGCATCCAGTGTTTGCTTTTTGCTCTCAGCTTTTTGTTTTTCTATGCATTTGGGTTTTTTTTTTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467057 True 233 lncRNA 0.30 1 6135889 6136121

Neighbor

gene id symbol gene type direction distance location
CI01000299_06116505_06128180 GAS6 coding upstream 7439 6115638 ~ 6128450 (+)
CI01000299_06100005_06114087 NA coding upstream 21426 6099717 ~ 6114463 (+)
CI01000299_06074050_06097303 RASA3 coding upstream 38356 6074050 ~ 6097533 (+)
CI01000299_06029307_06034445 NA coding upstream 100933 6028957 ~ 6034956 (+)
CI01000299_06018839_06023448 NA coding upstream 112379 6018839 ~ 6023510 (+)
CI01000299_06177821_06180061 NA coding downstream 41700 6177821 ~ 6180191 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding downstream 81495 6217616 ~ 6221071 (+)
CI01000299_06223295_06227054 ADPRHL1 coding downstream 86771 6222892 ~ 6227186 (+)
CI01000299_06233485_06239858 NA coding downstream 96451 6232572 ~ 6239902 (+)
CI01000299_06269853_06274289 PCID2 coding downstream 133481 6269602 ~ 6274393 (+)
G406458 NA non-coding upstream 1846 6133843 ~ 6134043 (+)
G406220 NA non-coding upstream 110532 6025051 ~ 6025357 (+)
G406213 NA non-coding upstream 120242 6013408 ~ 6015647 (+)
G406427 NA non-coding upstream 186961 5948698 ~ 5948928 (+)
G406168 NA non-coding upstream 205960 5928182 ~ 5929929 (+)
G406461 NA non-coding downstream 13478 6149599 ~ 6151122 (+)
G406470 NA non-coding downstream 47073 6183194 ~ 6183531 (+)
G406162 NA non-coding downstream 53658 6189779 ~ 6197674 (+)
G406478 NA non-coding downstream 70713 6206834 ~ 6207044 (+)
G406196 NA non-coding downstream 129633 6265754 ~ 6266230 (+)
G406244 NA other upstream 762310 5371181 ~ 5373579 (+)
G406096 NA other upstream 1208045 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1431264 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1629972 4480553 ~ 4493116 (+)
G405842 NA other upstream 1815748 4295533 ~ 4320141 (+)
G406161 NA other downstream 101717 6237838 ~ 6300508 (+)

Expression


Co-expression Network