G406470


Basic Information

Item Value
gene id G406470
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6183194 ~ 6183531 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467064
ACTGTTGGCCAGAGGAGAACTGGCCCCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTTAACACCAATTTGCCACTTGTCTGCCACCTGATGTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTAAGAGCTGCTGTGCAGCCAAACAATGTACCAGTTATCAATGTAAAGCTGCTTTGACACAATCTACATTGTAAAAAGCGCTATATAAATAAAGGTGACTTGACTTGACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467064 True 338 lncRNA 0.44 1 6183194 6183531

Neighbor

gene id symbol gene type direction distance location
CI01000299_06177821_06180061 NA coding upstream 3003 6177821 ~ 6180191 (+)
CI01000299_06116505_06128180 GAS6 coding upstream 54744 6115638 ~ 6128450 (+)
CI01000299_06100005_06114087 NA coding upstream 68731 6099717 ~ 6114463 (+)
CI01000299_06074050_06097303 RASA3 coding upstream 85661 6074050 ~ 6097533 (+)
CI01000299_06029307_06034445 NA coding upstream 148238 6028957 ~ 6034956 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding downstream 34085 6217616 ~ 6221071 (+)
CI01000299_06223295_06227054 ADPRHL1 coding downstream 39361 6222892 ~ 6227186 (+)
CI01000299_06233485_06239858 NA coding downstream 49041 6232572 ~ 6239902 (+)
CI01000299_06269853_06274289 PCID2 coding downstream 86071 6269602 ~ 6274393 (+)
CI01000299_06312445_06318421 NA coding downstream 128509 6312040 ~ 6318421 (+)
G406461 NA non-coding upstream 32072 6149599 ~ 6151122 (+)
G406463 NA non-coding upstream 47073 6135889 ~ 6136121 (+)
G406458 NA non-coding upstream 49151 6133843 ~ 6134043 (+)
G406220 NA non-coding upstream 157837 6025051 ~ 6025357 (+)
G406213 NA non-coding upstream 167547 6013408 ~ 6015647 (+)
G406162 NA non-coding downstream 6248 6189779 ~ 6197674 (+)
G406478 NA non-coding downstream 23303 6206834 ~ 6207044 (+)
G406196 NA non-coding downstream 82223 6265754 ~ 6266230 (+)
G406142 NA non-coding downstream 95888 6279419 ~ 6286426 (+)
G406172 NA non-coding downstream 126877 6310408 ~ 6311699 (+)
G406244 NA other upstream 809615 5371181 ~ 5373579 (+)
G406096 NA other upstream 1255350 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1478569 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1677277 4480553 ~ 4493116 (+)
G405842 NA other upstream 1863053 4295533 ~ 4320141 (+)
G406161 NA other downstream 54307 6237838 ~ 6300508 (+)

Expression


Co-expression Network