G406161


Basic Information

Item Value
gene id G406161
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6237838 ~ 6300508 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU466732
TTCTTTTTTTTTTTTTTTTTTTTCAACATTTGAAAAAATTATTTATTTTTCATATATAACCATGTTCTGCCATTGATTATTATATATACTCACAAGTGTGCCATTTTTTTTAATTGCAAAAGTACATGTTCTGGTGTTTGCCAGTGTTCAGTGTTGTGGAAGCGTCACTCTTCGGGAAGTTGCAAATTTAACTTGAGCACAAAATTGGAATATCACATAAAACATTTCCAAATAAAGCAGCGTTTCCATCCATACAATAGAACAAAATTATCACTTTCTGGGAAACTGGCACAAAATATCAGTAATAAAAATTGAAGTGGCTCTTTTTCCTCCATCATAAATGAGTTTGTCTCAGAGCGTCAGACGAAACACAAAAACTGTCATGTGATCTTGCGTTCGGATGCTGGTGTTCGGGAACACAATCGTGTGAGACGCTTCTGGAGGGAATTAAACCAAATCATTCTGATGACAGACTTTGACTCAGACGTTTCAGAACCACCAAACCAACATTTGAGATGCTGCGATGCGATTGGTCCGCTGGTTAGTCCAGTTATCCAATCACAGAGTCACACGAGCGTTTTGTTGTGCATCAAAGGATTATTCAGTAAATGTGTTTCCAACGTAGTTTATGCACGTCTTCTTATTGGATAAAAAATTATCTGCCTTAATTGGGTGTATTTTTTATGCACATTTTTAGAATTTTTACGCATCATCAGGCATCCACTTCCAAACGAAAGAGAACATGACAGCGTTTATTGTGTTTCGTCTGACGCTCTGAGACAAACTCATTTATGATGCGGGAAAAAAAGCCAGTTTAGAGTTTTATATTTTGCACCATGAATTTTTGTTGTGCATTGAGGGATTTATTCTATAAAACTATCGTAATTTATGTGCATGTCTTCTTATCGGATTAAAAAAATGATCTGCCTCAATTGAGCTCGTACTTTTTTTAGAATTCATGTGCATCTTGGCGTTTCCATCCAACAATTTTACATGCAATATCCCAAAATTCACATAAAAACTGGTCAATGGAAACATAGCTCATGACTGACTTCAGTGACTGTGAAAATCTGAACACACTTCACCTTACATAACATTCAGAAACTCTTGTATTCATACGCTGGCCATAGTCTTCAGAATCCACTCCACAAAGACGGACACCCGCGTGTAGATGCCGTAGACGTTGGCGCGTGCGCAGCCTTTCCCCCAGCTCACGATTCCTGTCAGAAACCATGTGTTTCTGTAGCGGGTGACCAGCGGCCCTCCGCTGTCCCCCTGACAGGAGTCACGGCCGCCCTCGATGAAGCCGGCGCACAGCATGTTCCTGGTCACCTTCAGACCCGAGTTCTCCCGACACTCCTCTAAGGAGACCCTCGGCACCTCCAGCTTCTGGAGAACCAGAGACGGCGGTCCCGACTGCGCCATGCGACCCCACCCGCTGACAGTGGACATGCGGATGGCTCCTATGGTGCGTCCGAACGTGCCGTTAGCAGGAGGAAGGCAGGCGGGAATGGCGAAGCGGTCGAGCGTGACGGGGCTGAGGAGACGCAGCAGTGCGATGTCACTGTCCGTGCTGGAGTGGTTGTACCGCGGGTGGATGAACACTTTAGACACTTCCCTCATCTGCTCTGTTCCTTCGTCTTTATCGAGGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466732 True 1654 TUCP 0.44 2 6237838 6300508

Neighbor

gene id symbol gene type direction distance location
CI01000299_06223295_06227054 ADPRHL1 coding upstream 10652 6222892 ~ 6227186 (+)
CI01000299_06217616_06220842 DCNL2, DCUN1D2, DCUN1D2A coding upstream 16767 6217616 ~ 6221071 (+)
CI01000299_06177821_06180061 NA coding upstream 57647 6177821 ~ 6180191 (+)
CI01000299_06116505_06128180 GAS6 coding upstream 109388 6115638 ~ 6128450 (+)
CI01000299_06100005_06114087 NA coding upstream 123375 6099717 ~ 6114463 (+)
CI01000299_06312445_06318421 NA coding downstream 11532 6312040 ~ 6318421 (+)
CI01000299_06322253_06326504 CREG1 coding downstream 21745 6322253 ~ 6326562 (+)
CI01000299_06396938_06400105 NA coding downstream 96430 6396938 ~ 6401342 (+)
CI01000299_06416707_06422267 NA coding downstream 116199 6416707 ~ 6422648 (+)
CI01000299_06424909_06425694 NA coding downstream 124303 6424811 ~ 6425733 (+)
G406478 NA non-coding upstream 30794 6206834 ~ 6207044 (+)
G406162 NA non-coding upstream 40164 6189779 ~ 6197674 (+)
G406470 NA non-coding upstream 54307 6183194 ~ 6183531 (+)
G406461 NA non-coding upstream 86716 6149599 ~ 6151122 (+)
G406463 NA non-coding upstream 101717 6135889 ~ 6136121 (+)
G406172 NA non-coding downstream 9900 6310408 ~ 6311699 (+)
G406480 NA non-coding downstream 22677 6323185 ~ 6323623 (+)
G406494 NA non-coding downstream 91572 6392080 ~ 6392356 (+)
CI01000299_06541306_06541820 NA non-coding downstream 240754 6541262 ~ 6541985 (+)
G406244 NA other upstream 864259 5371181 ~ 5373579 (+)
G406096 NA other upstream 1309994 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1533213 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1731921 4480553 ~ 4493116 (+)
G405842 NA other upstream 1917697 4295533 ~ 4320141 (+)

Expression


Co-expression Network